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We present numerical results based on a simplified ecological system in evolution, showing features of extinction similar to that claimed for the biosystem on Earth. In the model each species consists of a population in interaction with the…

adap-org · Physics 2009-10-28 Guillermo Abramson

We present a model for evolution and extinction in large ecosystems. The model incorporates the effects of interactions between species and the influences of abiotic environmental factors. We study the properties of the model by approximate…

adap-org · Physics 2008-02-03 Bruce W. Roberts , M. E. J. Newman

A class of models for large-scale evolution and mass extinctions is presented. These models incorporate environmental changes on all scales, from influences on a single species to global effects. This is a step towards a unified picture of…

adap-org · Physics 2007-05-23 C. Wilke , S. Altmeyer , T. Martinetz

A mathematical model of interacting species filling ecological niches left by the extinction of others is introduced. Species organize themselves into genera of all sizes. The size of a genus on average grows linearly with its age,…

Condensed Matter · Physics 2008-02-03 Susanna Manrubia , Maya Paczuski

A simple model of biological extinction with variable system size is presented that exhibits a power-law distribution of extinction event sizes. The model is a generalization of a model recently introduced by Newman (Proc. R. Soc. Lond.…

Biological Physics · Physics 2016-09-08 C. Wilke , T. Martinetz

Introducing the effect of extinction into the so-called replicator equations in mathematical biology, we construct a general model of ecosystems. The present model shows mass extinction by its own extinction dynamics when the system…

adap-org · Physics 2008-02-03 Kei Tokita , Ayumu Yasutomi

We propose a model of multispecies populations surviving on distributed resources. System dynamics are investigated under changes in abiotic factors such as the climate, as parameterized through environmental temperature. In particular, we…

Populations and Evolution · Quantitative Biology 2017-10-25 I. Sudakov , S. A. Vakulenko , D. Kirievskaya , K. M. Golden

We introduce a new model for large scale evolution and extinction in which species are organized into food chains. The system evolves by two processes: origination/speciation and extinction. In the model, extinction of a given species can…

Statistical Mechanics · Physics 2007-05-23 Luis A. N. Amaral , Martin Meyer

We introduce a simple computational model that, with a microscopic dynamics driven by natural selection and mutation alone, allows the description of true speciation events. A statistical analysis of the so generated evolutionary tree…

Populations and Evolution · Quantitative Biology 2009-11-11 V. Schwammle , E. Brigatti

We investigate the formation of stable ecological networks where many species share the same resource. We show that such stable ecosystem naturally occurs as a result of extinctions. We obtain an analytical relation for the number of…

Populations and Evolution · Quantitative Biology 2017-04-05 V. Kozlov , S. Vakulenko , U. Wennergren

Fluctuations in diversity and extinction sizes are discussed and compared for two different, individual-based models of biological coevolution. Both models display power-law distributions for various quantities of evolutionary interest,…

Populations and Evolution · Quantitative Biology 2007-05-23 Per Arne Rikvold

The impact of environmental fluctuation on species diversity is studied with a model of the evolutionary ecology of microorganisms. We show that environmental fluctuation induces evolutionary branching and assures the consequential…

Populations and Evolution · Quantitative Biology 2015-05-13 Masashi Tachikawa

We study the stochastic evolution of four species in cyclic competition in a well mixed environment. In systems composed of a finite number $N$ of particles these simple interaction rules result in a rich variety of extinction scenarios,…

Statistical Mechanics · Physics 2012-07-09 C. H. Durney , S. O. Case , M. Pleimling , R. K. P. Zia

The statistical properties of an ecosystem composed of species interacting via pairwise, random interactions and deterministic, concentration limiting self-interaction are studied analytically with tools of equilibrium statistical mechanics…

Disordered Systems and Neural Networks · Physics 2009-11-07 Viviane M. de Oliveira , J. F. Fontanari

A number of authors have in recent years proposed that the processes of macroevolution may give rise to self-organized critical phenomena which could have a significant effect on the dynamics of ecosystems. In particular it has been…

adap-org · Physics 2008-02-03 M. E. J. Newman

Macroevolution is considered as a problem of stochastic dynamics in a system with many competing agents. Evolutionary events (speciations and extinctions) are triggered by fitness records found by random exploration of the agents' fitness…

adap-org · Physics 2017-01-11 Paolo Sibani , Michael Brandt , Preben Alstroem

We propose a stochastic model for evolution through mutation and natural selection of a population that evolves on a $\bbT_d^+$ tree. We think of this model as a way of describing the evolution fitness landscape of a population. We obtain…

Probability · Mathematics 2021-04-13 Carolina Grejo , Fabio Lopes , Fábio Machado , Alejandro Roldán-Correa

We propose a novel network growth model coupled with the competition interaction to simulate macroevolution. Our work shows that the competition plays an important role in macroevolution and it is more rational to describe the interaction…

Populations and Evolution · Quantitative Biology 2007-07-11 Shao-Meng Qin , Yong Chen , Pan Zhang

A new model ecosystem consisting of many interacting species is introduced. The species are connected through a random matrix with a given connectivity. It is shown that the system is organized close to a boundary of marginal stability in…

adap-org · Physics 2007-05-23 Ricard V. Sole , David Alonso , Alan McKane

Highly-diverse ecosystems exhibit a broad distribution of population sizes and species turnover, where species at high and low abundances are exchanged over time. We show that these two features generically emerge in the fluctuating phase…

Populations and Evolution · Quantitative Biology 2024-01-09 Thibaut Arnoulx de Pirey , Guy Bunin
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