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Automated paper reproduction -- generating executable code from academic papers -- is bottlenecked not by information retrieval but by the tacit knowledge that papers inevitably leave implicit. We formalize this challenge as the progressive…

Artificial Intelligence · Computer Science 2026-03-03 Lehui Li , Ruining Wang , Haochen Song , Yaoxin Mao , Tong Zhang , Yuyao Wang , Jiayi Fan , Yitong Zhang , Jieping Ye , Chengqi Zhang , Yongshun Gong

Selecting the right knowledge is critical when using large language models (LLMs) to solve domain-specific data analysis tasks. However, most retrieval-augmented approaches rely primarily on lexical or embedding similarity, which is often a…

Computation and Language · Computer Science 2026-04-28 Xinyi Huang

Knowledge Graphs (KGs) structure real-world entities and their relationships into triples, enhancing machine reasoning for various tasks. While domain-specific KGs offer substantial benefits, their manual construction is often inefficient…

Computation and Language · Computer Science 2025-06-02 Jiaqi Sun , Shiyou Qian , Zhangchi Han , Wei Li , Zelin Qian , Dingyu Yang , Jian Cao , Guangtao Xue

Existing representation learning methods in graph convolutional networks are mainly designed by describing the neighborhood of each node as a perceptual whole, while the implicit semantic associations behind highly complex interactions of…

Artificial Intelligence · Computer Science 2021-01-19 Likang Wu , Zhi Li , Hongke Zhao , Qi Liu , Jun Wang , Mengdi Zhang , Enhong Chen

Knowledge graphs (KGs) are a popular way to organise information based on ontologies or schemas and have been used across a variety of scenarios from search to recommendation. Despite advances in KGs, representing knowledge remains a…

Artificial Intelligence · Computer Science 2023-10-10 Christos Theodoropoulos , Natasha Mulligan , Thaddeus Stappenbeck , Joao Bettencourt-Silva

Developing generalizable models that can effectively learn from limited data and with minimal reliance on human supervision is a significant objective within the machine learning community, particularly in the era of deep neural networks.…

Computer Vision and Pattern Recognition · Computer Science 2023-11-16 Wenxuan Ma , Shuang Li , Lincan Cai , Jingxuan Kang

Within clinical, biomedical, and translational science, an increasing number of projects are adopting graphs for knowledge representation. Graph-based data models elucidate the interconnectedness between core biomedical concepts, enable…

Objective. Supervised learning paradigms are often limited by the amount of labeled data that is available. This phenomenon is particularly problematic in clinically-relevant data, such as electroencephalography (EEG), where labeling can be…

Machine Learning · Statistics 2020-08-03 Hubert Banville , Omar Chehab , Aapo Hyvärinen , Denis-Alexander Engemann , Alexandre Gramfort

Federated Graph Learning (FGL) has emerged as a powerful paradigm for decentralized training of graph neural networks while preserving data privacy. However, existing FGL methods are predominantly designed for static graphs and rely on…

Machine Learning · Computer Science 2026-04-01 Yuxuan Liu , Wenchao Xu , Haozhao Wang , Zhiming He , Zhaofeng Shi , Chongyang Xu , Peichao Wang , Boyuan Zhang

Knowledge graphs and large language models (LLMs) are key tools for biomedical knowledge integration and reasoning, facilitating structured organization of scientific articles and discovery of complex semantic relationships. However,…

Computation and Language · Computer Science 2025-04-01 Yichun Feng , Jiawei Wang , Ruikun He , Lu Zhou , Yixue Li

Arguments often do not make explicit how a conclusion follows from its premises. To compensate for this lack, we enrich arguments with structured background knowledge to support knowledge-intense argumentation tasks. We present a new…

Computation and Language · Computer Science 2023-05-16 Moritz Plenz , Juri Opitz , Philipp Heinisch , Philipp Cimiano , Anette Frank

The rapid expansion of e-commerce platforms generates vast amounts of unstructured product data, creating significant challenges for information retrieval, recommendation systems, and data analytics. Knowledge Graphs (KGs) offer a…

Artificial Intelligence · Computer Science 2025-11-17 Dimitar Peshevski , Riste Stojanov , Dimitar Trajanov

Formulating and answering logical queries is a standard communication interface for knowledge graphs (KGs). Alleviating the notorious incompleteness of real-world KGs, neural methods achieved impressive results in link prediction and…

Artificial Intelligence · Computer Science 2022-11-10 Mikhail Galkin , Zhaocheng Zhu , Hongyu Ren , Jian Tang

The context-aware emotional reasoning ability of AI systems, especially in conversations, is of vital importance in applications such as online opinion mining from social media and empathetic dialogue systems. Due to the implicit nature of…

Computation and Language · Computer Science 2023-08-10 Kailai Yang , Tianlin Zhang , Shaoxiong Ji , Sophia Ananiadou

The scarcity of high-quality knowledge graphs (KGs) remains a critical bottleneck for downstream AI applications, as existing extraction methods rely heavily on error-prone pattern-matching techniques or resource-intensive large language…

Computation and Language · Computer Science 2025-10-28 Teng Lin

Large Language Models (LLMs) have been extensively adopted in Knowledge Graph Completion (KGC), showcasing significant research advancements. However, as black-box models driven by deep neural architectures, current LLM-based KGC methods…

Computation and Language · Computer Science 2025-10-22 Wenbin Guo , Xin Wang , Jiaoyan Chen , Zhao Li , Zirui Chen

Enterprise Knowledge Graphs have become essential for unifying heterogeneous data and enforcing semantic governance. However, the construction of their underlying ontologies remains a resource-intensive, manual process that relies heavily…

Artificial Intelligence · Computer Science 2026-02-03 Abdulsobur Oyewale , Tommaso Soru

Automated vulnerability detection in critical-infrastructure software confronts a fundamental barrier: industrial software is routinely deployed as stripped, symbol-free binaries that deprive conventional Software Composition Analysis of…

Software Engineering · Computer Science 2026-05-11 Bowei Ning , Xuejun Zong , Lian Lian , Kan He , Yifei Sun , Yuxiang Lei , Plamen Vasilev

Knowledge graph-based dialogue systems can narrow down knowledge candidates for generating informative and diverse responses with the use of prior information, e.g., triple attributes or graph paths. However, most current knowledge graph…

Computation and Language · Computer Science 2020-04-21 Hongcai Xu , Junpeng Bao , Junqing Wang

Large language models (LLMs) are rapidly transforming various domains, including biomedicine and healthcare, and demonstrate remarkable potential from scientific research to new drug discovery. Graph-based retrieval-augmented generation…

Quantitative Methods · Quantitative Biology 2025-11-14 Guofeng Meng , Li Shen , Qiuyan Zhong , Wei Wang , Haizhou Zhang , Xiaozhen Wang