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Recently the Transformer structure has shown good performances in graph learning tasks. However, these Transformer models directly work on graph nodes and may have difficulties learning high-level information. Inspired by the vision…

Machine Learning · Computer Science 2023-04-11 Han Gao , Xu Han , Jiaoyang Huang , Jian-Xun Wang , Li-Ping Liu

Transformer-based LLMs demonstrate strong performance on graph reasoning tasks, yet their internal mechanisms remain underexplored. To uncover these reasoning process mechanisms in a fundamental and unified view, we set the basic…

Machine Learning · Computer Science 2025-09-25 Xinnan Dai , Chung-Hsiang Lo , Kai Guo , Shenglai Zeng , Dongsheng Luo , Jiliang Tang

In the last two decades we are witnessing a huge increase of valuable big data structured in the form of graphs or networks. To apply traditional machine learning and data analytic techniques to such data it is necessary to transform graphs…

Machine Learning · Computer Science 2024-03-22 Aleksandar Tomčić , Miloš Savić , Miloš Radovanović

Graph partition is a fundamental problem of parallel computing for big graph data. Many graph partition algorithms have been proposed to solve the problem in various applications, such as matrix computations and PageRank, etc., but none has…

Social and Information Networks · Computer Science 2015-01-05 Xiaoming Liu , Yadong Zhou , Xiaohong Guan

To improve the explainability of leading Transformer networks used in NLP, it is important to tease apart genuine symbolic rules from merely associative input-output patterns. However, we identify several inconsistencies in how…

Machine Learning · Computer Science 2023-03-02 Tommi Gröndahl , Yujia Guo , N. Asokan

I start by reviewing some basic properties of random graphs. I then consider the role of random walks in complex networks and show how they may be used to explain why so many long tailed distributions are found in real data sets. The key…

Statistical Mechanics · Physics 2012-12-11 T. S. Evans

Scattering transforms are non-trainable deep convolutional architectures that exploit the multi-scale resolution of a wavelet filter bank to obtain an appropriate representation of data. More importantly, they are proven invariant to…

Machine Learning · Computer Science 2019-06-13 Fernando Gama , Joan Bruna , Alejandro Ribeiro

In transformers, the positional encoding (PE) provides essential information that distinguishes the position and order amongst tokens in a sequence. Most prior investigations of PE effects on generalization were tailored to 1D input…

Machine Learning · Computer Science 2025-06-24 Takuya Ito , Luca Cocchi , Tim Klinger , Parikshit Ram , Murray Campbell , Luke Hearne

Reasoning capability is essential to ensure the factual correctness of the responses of transformer-based Large Language Models (LLMs), and robust reasoning about transitive relations is instrumental in many settings, such as causal…

Computation and Language · Computer Science 2026-04-23 Amit Roy , Abulhair Saparov

We investigate the relationship between the geometry of token embeddings and their role in the next token prediction within transformer models. An important aspect of this connection uses the notion of empirical measure, which encodes the…

Computation and Language · Computer Science 2025-01-22 Karthik Viswanathan , Yuri Gardinazzi , Giada Panerai , Alberto Cazzaniga , Matteo Biagetti

Transformers, adapted from natural language processing, are emerging as a leading approach for graph representation learning. Contemporary graph transformers often treat nodes or edges as separate tokens. This approach leads to…

Machine Learning · Computer Science 2023-10-04 Zihan Pengmei , Zimu Li , Chih-chan Tien , Risi Kondor , Aaron R. Dinner

We consider representation learning on periodic graphs encoding crystal materials. Different from regular graphs, periodic graphs consist of a minimum unit cell repeating itself on a regular lattice in 3D space. How to effectively encode…

Machine Learning · Computer Science 2022-09-27 Keqiang Yan , Yi Liu , Yuchao Lin , Shuiwang Ji

In this paper, we investigate random walk based token circulation in dynamic environments subject to failures. We describe hypotheses on the dynamic environment that allow random walks to meet the important property that the token visits…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-09-19 Thibault Bernard , Alain Bui , Devan Sohier

This study proposes an unsupervised anomaly detection method for distributed backend service systems, addressing practical challenges such as complex structural dependencies, diverse behavioral evolution, and the absence of labeled data.…

Machine Learning · Computer Science 2025-08-14 Yun Zi , Ming Gong , Zhihao Xue , Yujun Zou , Nia Qi , Yingnan Deng

Which transformer scaling regimes are able to perfectly solve different classes of algorithmic problems? While tremendous empirical advances have been attained by transformer-based neural networks, a theoretical understanding of their…

Positional Encodings (PEs) are essential for injecting structural information into Graph Neural Networks (GNNs), particularly Graph Transformers, yet their empirical impact remains insufficiently understood. We introduce a unified…

Machine Learning · Computer Science 2026-01-15 Florian Grötschla , Jiaqing Xie , Roger Wattenhofer

The betweenness centrality of graphs using random walk paths instead of geodesics is studied. A scaling collapse with no adjustable parameters is obtained as the graph size $N$ is varied; the scaling curve depends on the graph model. A…

Physics and Society · Physics 2016-07-04 O. Narayan , I. Saniee

Owing to their versatility, graph structures admit representations of intricate relationships between the separate entities comprising the data. We formalise the notion of connection between two vertex sets in terms of edge and vertex…

Machine Learning · Computer Science 2022-08-23 Peter Belcak , Roger Wattenhofer

Graph convolutional networks (GCNs) are a widely used method for graph representation learning. To elucidate the capabilities and limitations of GCNs, we investigate their power, as a function of their number of layers, to distinguish…

Machine Learning · Statistics 2020-05-14 Abram Magner , Mayank Baranwal , Alfred O. Hero

The concept of intransitiveness for games, which is the condition for which there is no first-player winning strategy can arise surprisingly, as happens in the Penney game, an extension of the heads or tails. Since a game can be converted…

Physics and Society · Physics 2024-03-07 Alberto Baldi , Franco Bagnoli
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