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Graph transformers are a recent advancement in machine learning, offering a new class of neural network models for graph-structured data. The synergy between transformers and graph learning demonstrates strong performance and versatility…

Machine Learning · Computer Science 2025-12-23 Ahsan Shehzad , Feng Xia , Shagufta Abid , Ciyuan Peng , Shuo Yu , Dongyu Zhang , Karin Verspoor

Many applications require to learn, mine, analyze and visualize large-scale graphs. These graphs are often too large to be addressed efficiently using conventional graph processing technologies. Many applications have requirements to…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-23 Santosh Pandey , Lingda Li , Adolfy Hoisie , Xiaoye S. Li , Hang Liu

In a graph, a vertex dominates itself and its neighbors, and a dominating set is a set of vertices that together dominate the entire graph. Given a graph and two dominating sets of equal size $k$, the {\em Dominating Set Reconfiguration…

Discrete Mathematics · Computer Science 2025-07-16 Jona Dirks , Alexandre Vigny

The role of high-degree nodes, or hubs, in shaping graph dynamics and structure is well-recognized in network science, yet their influence remains underexplored in the context of dynamic graph embedding. Recent advances in representation…

Social and Information Networks · Computer Science 2025-07-24 Aleksandar Tomčić , Miloš Savić , Dušan Simić , Miloš Radovanović

An independent set of a graph $G$ is a vertex subset $I$ such that there is no edge joining any two vertices in $I$. Imagine that a token is placed on each vertex of an independent set of $G$. The $\mathsf{TS}$- ($\mathsf{TS}_k$-)…

Combinatorics · Mathematics 2023-05-18 David Avis , Duc A. Hoang

The transformer architecture has shown remarkable success in various domains, such as natural language processing and computer vision. When it comes to graph learning, transformers are required not only to capture the interactions between…

Machine Learning · Computer Science 2024-01-30 Van Thuy Hoang , O-Joun Lee

Graph-structured data arise in wide applications, such as computer vision, bioinformatics, and social networks. Quantifying similarities among graphs is a fundamental problem. In this paper, we develop a framework for computing graph…

Machine Learning · Statistics 2018-09-11 Zhen Zhang , Mianzhi Wang , Yijian Xiang , Yan Huang , Arye Nehorai

The Fiedler vector of a graph, namely the eigenvector corresponding to the second smallest eigenvalue of a graph Laplacian matrix, plays an important role in spectral graph theory with applications in problems such as graph bi-partitioning…

Probability · Mathematics 2022-10-13 Vishwaraj Doshi , Do Young Eun

Transformers often fail to learn generalizable algorithms, instead relying on brittle heuristics. Using graph connectivity as a testbed, we explain this phenomenon both theoretically and empirically. We consider a simplified Transformer…

Machine Learning · Computer Science 2026-02-19 Qilin Ye , Deqing Fu , Robin Jia , Vatsal Sharan

Image tokenizers map images to sequences of discrete tokens, and are a crucial component of autoregressive transformer-based image generation. The tokens are typically associated with spatial locations in the input image, arranged in raster…

Computer Vision and Pattern Recognition · Computer Science 2025-06-12 Carlos Esteves , Mohammed Suhail , Ameesh Makadia

Graph convolutional networks (GCNs) are a widely used method for graph representation learning. We investigate the power of GCNs, as a function of their number of layers, to distinguish between different random graph models on the basis of…

Machine Learning · Statistics 2020-02-14 Abram Magner , Mayank Baranwal , Alfred O. Hero

SimRank is a similarity measure between vertices in a graph, which has become a fundamental technique in graph analytics. Recently, many algorithms have been proposed for efficient evaluation of SimRank similarities. However, the existing…

Databases · Computer Science 2015-12-10 Rong Zhu , Zhaonian Zou , Jianzhong Li

Large language models have evolved to process multiple modalities beyond text, such as images and audio, which motivates us to explore how to effectively leverage them for graph reasoning tasks. The key question, therefore, is how to…

Supervised learning with tabular data presents unique challenges, including low data sizes, the absence of structural cues, and heterogeneous features spanning both categorical and continuous domains. Unlike vision and language tasks, where…

Machine Learning · Computer Science 2025-12-18 Yunze Leng , Rohan Ghosh , Mehul Motani

Graph transformers extend global self-attention to graph-structured data, achieving notable success in graph learning. Recently, random walk structural encoding (RWSE) has been found to further enhance their predictive power by encoding…

Machine Learning · Computer Science 2025-06-03 Louis Airale , Antonio Longa , Mattia Rigon , Andrea Passerini , Roberto Passerone

Progress on graph foundation models is hindered by benchmark practices that conflate the contributions of node features and graph structure, making it hard to tell whether a model actually learns from connectivity, or whether it even needs…

Machine Learning · Computer Science 2026-05-08 Richard von Moos , Mathieu Alain , Bastian Rieck

Graph neural networks based on iterative one-hop message passing have been shown to struggle in harnessing the information from distant nodes effectively. Conversely, graph transformers allow each node to attend to all other nodes directly,…

Machine Learning · Computer Science 2024-06-06 Yuhui Ding , Antonio Orvieto , Bobby He , Thomas Hofmann

Graph neural networks (GNNs) have been widely used in representation learning on graphs and achieved state-of-the-art performance in tasks such as node classification and link prediction. However, most existing GNNs are designed to learn…

Machine Learning · Computer Science 2020-02-06 Seongjun Yun , Minbyul Jeong , Raehyun Kim , Jaewoo Kang , Hyunwoo J. Kim

Transformers have become the predominant architecture in foundation models due to their excellent performance across various domains. However, the substantial cost of scaling these models remains a significant concern. This problem arises…

Standard Transformers have a fixed computational depth, fundamentally limiting their ability to generalize to tasks requiring variable-depth reasoning, such as multi-hop graph traversal or nested logic. We propose a depth-recurrent…

Machine Learning · Computer Science 2026-03-24 Hung-Hsuan Chen
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