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Predicting interactions between biomolecules, such as protein-protein complexes, remains a challenging problem. Despite the many advancements done so far, the performances of docking protocols are deeply dependent on their capability of…

Biomolecules · Quantitative Biology 2025-08-19 Greta Grassmann , Lorenzo Di Rienzo , Giancarlo Ruocco , Mattia Miotto , Edoardo Milanetti

IMACT-CXR is an interactive multi-agent conversational tutor that helps trainees interpret chest X-rays by unifying spatial annotation, gaze analysis, knowledge retrieval, and image-grounded reasoning in a single AutoGen-based workflow. The…

Artificial Intelligence · Computer Science 2026-04-17 Tuan-Anh Le , Anh Mai Vu , David Yang , Akash Awasthi , Hien Van Nguyen

Accurate identification of protein binding sites is crucial for understanding biomolecular interaction mechanisms and for the rational design of drug targets. Traditional predictive methods often struggle to balance prediction accuracy with…

Machine Learning · Computer Science 2026-01-06 Weisen Yang , Hanqing Zhang , Wangren Qiu , Xuan Xiao , Weizhong Lin

Data sparsity and cold-start problems are persistent challenges in recommendation systems. Cross-domain recommendation (CDR) is a promising solution that utilizes knowledge from the source domain to improve the recommendation performance in…

Information Retrieval · Computer Science 2023-11-07 Yanyu Chen , Yao Yao , Wai Kin Victor Chan , Li Xiao , Kai Zhang , Liang Zhang , Yun Ye

CD8+ "killer" T cells and CD4+ "helper" T cells play a central role in the adaptive immune system by recognizing antigens presented by Major Histocompatibility Complex (pMHC) molecules via T Cell Receptors (TCRs). Modeling binding between T…

Computational Engineering, Finance, and Science · Computer Science 2026-03-09 Jiarui Li , Zixiang Yin , Haley Smith , Zhengming Ding , Samuel J. Landry , Ramgopal R. Mettu

Collaborative perception systems overcome single-vehicle limitations in long-range detection and occlusion scenarios by integrating multi-agent sensory data, improving accuracy and safety. However, frequent cooperative interactions and…

Computer Vision and Pattern Recognition · Computer Science 2025-09-30 Yunjiang Xu , Lingzhi Li , Jin Wang , Yupeng Ouyang , Benyuan Yang

In this paper, we introduce a new method for the task of interaction transfer. Given an example interaction between a source object and an agent, our method can automatically infer both surface and spatial relationships for the agent and…

Computer Vision and Pattern Recognition · Computer Science 2024-05-07 Zeyu Huang , Honghao Xu , Haibin Huang , Chongyang Ma , Hui Huang , Ruizhen Hu

Existing graph learning-based cognitive diagnosis (CD) methods have made relatively good results, but their student, exercise, and concept representations are learned and exchanged in an implicit unified graph, which makes the…

Machine Learning · Computer Science 2024-10-24 Shangshang Yang , Mingyang Chen , Ziwen Wang , Xiaoshan Yu , Panpan Zhang , Haiping Ma , Xingyi Zhang

Analogical reasoning is the process of discovering and mapping correspondences from a target subject to a base subject. As the most well-known computational method of analogical reasoning, Structure-Mapping Theory (SMT) abstracts both…

Artificial Intelligence · Computer Science 2022-11-22 Chen Ling , Tanmoy Chowdhury , Junji Jiang , Junxiang Wang , Xuchao Zhang , Haifeng Chen , Liang Zhao

Automating molecular design using deep reinforcement learning (RL) has the potential to greatly accelerate the search for novel materials. Despite recent progress on leveraging graph representations to design molecules, such methods are…

Machine Learning · Statistics 2021-06-08 Gregor N. C. Simm , Robert Pinsler , Gábor Csányi , José Miguel Hernández-Lobato

Click-Through Rate (CTR) prediction is one of the most important machine learning tasks in recommender systems, driving personalized experience for billions of consumers. Neural architecture search (NAS), as an emerging field, has…

Information Retrieval · Computer Science 2020-07-14 Qingquan Song , Dehua Cheng , Hanning Zhou , Jiyan Yang , Yuandong Tian , Xia Hu

What is a good local description of contact dynamics for contact-rich manipulation, and where can we trust this local description? While many approaches often rely on the Taylor approximation of dynamics with an ellipsoidal trust region, we…

Robotics · Computer Science 2025-11-04 H. J. Terry Suh , Tao Pang , Tong Zhao , Russ Tedrake

Vision and touch are two fundamental sensory modalities for robots, offering complementary information that enhances perception and manipulation tasks. Previous research has attempted to jointly learn visual-tactile representations to…

Computer Vision and Pattern Recognition · Computer Science 2025-06-27 Zhiyuan Wu , Yongqiang Zhao , Shan Luo

Clinical decision-making is inherently complex and fast-paced, particularly in emergency departments (EDs) where critical, rapid and high-stakes decisions are made. Clinical Decision Rules (CDRs) are standardized evidence-based tools that…

Adversarial examples reveal critical vulnerabilities in deep neural networks by exploiting their sensitivity to imperceptible input perturbations. While adversarial training remains the predominant defense strategy, it often incurs…

Machine Learning · Computer Science 2025-11-04 Longwei Wang , Ifrat Ikhtear Uddin , KC Santosh , Chaowei Zhang , Xiao Qin , Yang Zhou

Optical coherence tomography (OCT) is one of the non-invasive and easy-to-acquire biomarkers (the thickness of the retinal layers, which is detectable within OCT scans) being investigated to diagnose Alzheimer's disease (AD). This work aims…

Image and Video Processing · Electrical Eng. & Systems 2022-06-14 Paria Jeihouni , Omid Dehzangi , Annahita Amireskandari , Ali Dabouei , Ali Rezai , Nasser M. Nasrabadi

As a critical component for online advertising and marking, click-through rate (CTR) prediction has draw lots of attentions from both industry and academia field. Recently, the deep learning has become the mainstream methodological choice…

Information Retrieval · Computer Science 2022-07-12 Zhishan Zhao , Sen Yang , Guohui Liu , Dawei Feng , Kele Xu

Therapeutic antibody development has become an increasingly popular approach for drug development. To date, antibody therapeutics are largely developed using large scale experimental screens of antibody libraries containing hundreds of…

Quantitative Methods · Quantitative Biology 2022-10-07 Lin Li , Esther Gupta , John Spaeth , Leslie Shing , Tristan Bepler , Rajmonda Sulo Caceres

Relative pose estimation provides a promising way for achieving object-agnostic pose estimation. Despite the success of existing 3D correspondence-based methods, the reliance on explicit feature matching suffers from small overlaps in…

Computer Vision and Pattern Recognition · Computer Science 2025-11-21 Yihan Chen , Wenfei Yang , Huan Ren , Shifeng Zhang , Tianzhu Zhang , Feng Wu

Detecting coordinated inauthentic behavior on social media remains a critical and persistent challenge, as most existing approaches rely on superficial correlation analysis, employ static parameter settings, and demand extensive and…

Artificial Intelligence · Computer Science 2026-01-05 Weng Ding , Yi Han , Mu-Jiang-Shan Wang