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Functional magnetic resonance imaging (fMRI) is essential for developing encoding models that identify functional changes in language-related brain areas of individuals with Neurocognitive Disorders (NCD). While large language model…

Neurons and Cognition · Quantitative Biology 2024-07-16 Yuejiao Wang , Xianmin Gong , Lingwei Meng , Xixin Wu , Helen Meng

The partially separable functions (PSF) model is commonly adopted in dynamic MRI reconstruction, as is the underlying signal model in many reconstruction methods including the ones relying on low-rank assumptions. Even though the PSF model…

Image and Video Processing · Electrical Eng. & Systems 2026-01-21 Rodrigo A. Lobos , Xiaokai Wang , Rex T. L. Fung , Yongli He , David Frey , Dinank Gupta , Zhongming Liu , Jeffrey A. Fessler , Douglas C. Noll

A long-standing topic in artificial intelligence is the effective recognition of patterns from noisy images. In this regard, the recent data-driven paradigm considers 1) improving the representation robustness by adding noisy samples in…

Computer Vision and Pattern Recognition · Computer Science 2024-06-21 Shuren Qi , Yushu Zhang , Chao Wang , Tao Xiang , Xiaochun Cao , Yong Xiang

Multi-layer perceptrons (MLP) have proven to be effective scene encoders when combined with higher-dimensional projections of the input, commonly referred to as \textit{positional encoding}. However, scenes with a wide frequency spectrum…

Computer Vision and Pattern Recognition · Computer Science 2022-06-20 Zoe Landgraf , Alexander Sorkine Hornung , Ricardo Silveira Cabral

The development of robust and generalisable models for encoding the spatio-temporal dynamics of human brain activity is crucial for advancing neuroscientific discoveries. However, significant individual variation in the organisation of the…

Image and Video Processing · Electrical Eng. & Systems 2024-06-12 Simon Dahan , Logan Z. J. Williams , Yourong Guo , Daniel Rueckert , Emma C. Robinson

Decoding inner speech from the brain signal via hybridisation of fMRI and EEG data is explored to investigate the performance benefits over unimodal models. Two different bimodal fusion approaches are examined: concatenation of probability…

Data-driven modeling techniques have been explored in the spatial-temporal modeling of complex dynamical systems for many engineering applications. However, a systematic approach is still lacking to leverage the information from different…

Machine Learning · Computer Science 2024-10-15 Chuanqi Chen , Jin-Long Wu

Understanding how the human brain encodes and processes external visual stimuli has been a fundamental challenge in neuroscience. With advancements in artificial intelligence, sophisticated visual decoding architectures have achieved…

Human-Computer Interaction · Computer Science 2025-07-22 Jiahua Tang , Song Wang , Jiachen Zou , Chen Wei , Quanying Liu

Implicit neural representation (INR) has emerged as a promising solution for encoding volumetric data, offering continuous representations and seamless compatibility with the volume rendering pipeline. However, optimizing an INR network…

Computer Vision and Pattern Recognition · Computer Science 2025-02-17 Maizhe Yang , Kaiyuan Tang , Chaoli Wang

Resting-state functional magnetic resonance imaging (rs-fMRI) is a noninvasive technique pivotal for understanding human neural mechanisms of intricate cognitive processes. Most rs-fMRI studies compute a single static functional…

Neurons and Cognition · Quantitative Biology 2025-02-25 Bishal Thapaliya , Robyn Miller , Jiayu Chen , Yu-Ping Wang , Esra Akbas , Ram Sapkota , Bhaskar Ray , Pranav Suresh , Santosh Ghimire , Vince Calhoun , Jingyu Liu

Neuroscience studies have revealed that the brain encodes visual content and embeds information in neural activity. Recently, deep learning techniques have facilitated attempts to address visual reconstructions by mapping brain activity to…

Image and Video Processing · Electrical Eng. & Systems 2022-07-05 Pei-Chun Chang , Yan-Yu Tien , Chia-Lin Chen , Li-Fen Chen , Yong-Sheng Chen , Hui-Ling Chan

The MRI-derived brain network serves as a pivotal instrument in elucidating both the structural and functional aspects of the brain, encompassing the ramifications of diseases and developmental processes. However, prevailing methodologies,…

Machine Learning · Computer Science 2024-05-24 Haoteng Tang , Guodong Liu , Siyuan Dai , Kai Ye , Kun Zhao , Wenlu Wang , Carl Yang , Lifang He , Alex Leow , Paul Thompson , Heng Huang , Liang Zhan

Recent self-supervised advances in medical computer vision exploit global and local anatomical self-similarity for pretraining prior to downstream tasks such as segmentation. However, current methods assume i.i.d. image acquisition, which…

Computer Vision and Pattern Recognition · Computer Science 2023-12-13 Mengwei Ren , Neel Dey , Martin A. Styner , Kelly Botteron , Guido Gerig

fMRI semantic category understanding using linguistic encoding models attempt to learn a forward mapping that relates stimuli to the corresponding brain activation. Classical encoding models use linear multi-variate methods to predict the…

Machine Learning · Computer Science 2018-12-04 Subba Reddy Oota , Adithya Avvaru , Naresh Manwani , Raju S. Bapi

Neural encoding models aim to predict fMRI-measured brain responses to natural images. fMRI data is acquired as a 3D volume of voxels, where each voxel has a defined spatial location in the brain. However, conventional encoding models often…

Neurons and Cognition · Quantitative Biology 2026-02-11 Haomiao Chen , Keith W Jamison , Mert R. Sabuncu , Amy Kuceyeski

Recently, there has been a surge in the popularity of pre trained large language models (LLMs) (such as GPT-4), sweeping across the entire Natural Language Processing (NLP) and Computer Vision (CV) communities. These LLMs have demonstrated…

Computer Vision and Pattern Recognition · Computer Science 2024-01-09 Shuxiao Ma , Linyuan Wang , Senbao Hou , Bin Yan

Statistical modeling of fMRI data is challenging as the data are both spatially and temporally correlated. Spatially, measurements are taken at thousands of contiguous regions, called voxels, and temporally measurements are taken at…

Computation · Statistics 2017-10-05 Ming Teng , Farouk S. Nathoo , Timothy D. Johnson

The growing use of neuroimaging technologies generates a massive amount of biomedical data that exhibit high dimensionality. Tensor-based analysis of brain imaging data has been proved quite effective in exploiting their multiway nature.…

Numerical Analysis · Computer Science 2016-07-21 Christos Chatzichristos , Eleftherios Kofidis , Giannis Kopsinis , Sergios Theodoridis

A major tenet in theoretical neuroscience is that cognitive and behavioral processes are ultimately implemented in terms of the neural system dynamics. Accordingly, a major aim for the analysis of neurophysiological measurements should lie…

Machine Learning · Computer Science 2020-07-01 Georgia Koppe , Hazem Toutounji , Peter Kirsch , Stefanie Lis , Daniel Durstewitz

Structural magnetic resonance imaging (sMRI) provides accurate estimates of the brain's structural organization and learning invariant brain representations from sMRI is an enduring issue in neuroscience. Previous deep representation…

Computer Vision and Pattern Recognition · Computer Science 2023-06-21 Ning Jiang , Gongshu Wang , Tianyi Yan
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