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With the growing adoption of AI-based systems across everyday life, the need to understand their decision-making mechanisms is correspondingly increasing. The level at which we can trust the statistical inferences made from AI-based…

Machine Learning · Statistics 2024-04-15 Adam Spannaus , Heidi A. Hanson , Lynne Penberthy , Georgia Tourassi

We introduce ODEFormer, the first transformer able to infer multidimensional ordinary differential equation (ODE) systems in symbolic form from the observation of a single solution trajectory. We perform extensive evaluations on two…

Machine Learning · Computer Science 2023-10-10 Stéphane d'Ascoli , Sören Becker , Alexander Mathis , Philippe Schwaller , Niki Kilbertus

This contribution presents a parameter identification methodology for the accurate and fast estimation of model parameters in a pseudo-two-dimensional (P2D) battery model. The methodology consists of three key elements. First, the data for…

Systems and Control · Electrical Eng. & Systems 2025-07-21 L. D. Couto , K. Haghverdi , F. Guo , K. Trad , G. Mulder

Given experimental data, one of the main objectives of biological modeling is to construct a model which best represents the real world phenomena. In some cases, there could be multiple distinct models exhibiting the exact same dynamics,…

Combinatorics · Mathematics 2024-12-03 Cashous Bortner , John Gilliana , Dev Patel , Zaia Tamras

This work proposes a multimodal diffeomorphic registration method using Neural Ordinary Differential Equations (Neural ODEs). Nonrigid registration algorithms exhibit tradeoffs between their accuracy, the computational complexity of their…

Computer Vision and Pattern Recognition · Computer Science 2025-12-30 Salvador Rodriguez-Sanz , Monica Hernandez

Successful scientific applications of large-scale molecular dynamics often rely on automated methods for identifying the local crystalline structure of condensed phases. Many existing methods for structural identification, such as Common…

Materials Science · Physics 2016-05-24 Peter Mahler Larsen , Søren Schmidt , Jakob Schiøtz

Influence diagram is a graphical representation of belief networks with uncertainty. This article studies the structural properties of a probabilistic model in an influence diagram. In particular, structural controllability theorems and…

Artificial Intelligence · Computer Science 2013-03-25 Brian Y. Chan , Ross D. Shachter

Structural monitoring for complex built environments often suffers from mismatch between design, laboratory testing, and actual built parameters. Additionally, real-world structural identification problems encounter many challenges. For…

Machine Learning · Computer Science 2022-08-29 Xuyang Li , Hamed Bolandi , Talal Salem , Nizar Lajnef , Vishnu Naresh Boddeti

Structural analysis is a method for verifying equation-oriented models in the design of industrial systems. Existing structural analysis methods need flattening of the hierarchical models into an equation system for analysis. However, the…

Other Computer Science · Computer Science 2021-10-28 Chao Wang , Li Wan , Tifan Xiong , Yuanlong Xie , Shuting Wang , Jianwan Ding , Liping Chen

The development of new electronic structure methods is a very time consuming and error prone process when done by hand. SpinAdaptedSecondQuantization is an open-source Julia package we have developed for working with automated electronic…

Chemical Physics · Physics 2025-08-26 Marcus T. Lexander , Tor S. Haugland , Federico Rossi , Henrik Koch

Motivation: Estimating model parameters from experimental observations is one of the key challenges in systems biology and can be computationally very expensive. While the Julia programming language was recently developed as a high-level…

Quantitative Methods · Quantitative Biology 2020-11-06 Paul F. Lang , Sungho Shin , Victor M. Zavala

In this study, we explore the partial identification of nonseparable models with continuous endogenous and binary instrumental variables. We show that the structural function is partially identified when it is monotone or concave in the…

Methodology · Statistics 2023-06-22 Takuya Ishihara

Natural laws are often described through differential equations yet finding a differential equation that describes the governing law underlying observed data is a challenging and still mostly manual task. In this paper we make a step…

Machine Learning · Computer Science 2022-11-08 Sören Becker , Michal Klein , Alexander Neitz , Giambattista Parascandolo , Niki Kilbertus

Identifiability describes the possibility of determining the values of the unknown parameters that characterize a dynamic system from the knowledge of its inputs and outputs. This paper finds the general analytical condition that fully…

Optimization and Control · Mathematics 2023-05-03 Agostino Martinelli

Online monitoring aims to evaluate or to predict, at runtime, whether or not the behaviors of a system satisfy some desired specification. It plays a key role in safety-critical cyber-physical systems. In this work, we propose a new…

Systems and Control · Electrical Eng. & Systems 2023-11-10 Xinyi Yu , Weijie Dong , Xiang Yin , Shaoyuan Li

Handwritten Mathematical Expression Recognition is foundational for educational technologies, enabling applications like digital note-taking and automated grading. While modern encoder-decoder architectures with large language models excel…

Computer Vision and Pattern Recognition · Computer Science 2025-08-28 Jakob Seitz , Tobias Lengfeld , Radu Timofte

Ordinary differential equations (ODEs) can provide mechanistic models of temporally local changes of processes, where parameters are often informed by external knowledge. While ODEs are popular in systems modeling, they are less established…

Methodology · Statistics 2025-07-10 Maren Hackenberg , Astrid Pechmann , Clemens Kreutz , Janbernd Kirschner , Harald Binder

This paper studies system identification of high-dimensional ARMA models with binary-valued observations. The existing paper can only deal with the case where the regression term is only one-dimensional. In this paper, the ARMA model with…

Optimization and Control · Mathematics 2024-10-29 Xin Li , Ting Wang , Jin Guo , Yanlong Zhao

Identifiability concerns finding which unknown parameters of a model can be estimated from given input-output data. If some subset of the parameters of a model cannot be determined given input-output data, then we say the model is…

Algebraic Geometry · Mathematics 2014-11-03 Nicolette Meshkat , Seth Sullivant , Marisa Eisenberg

We present StructuralDecompose, an R package for modular and interpretable time series decomposition. Unlike existing approaches that treat decomposition as a monolithic process, StructuralDecompose separates the analysis into distinct…

Machine Learning · Computer Science 2025-10-07 Allen Daniel Sunny