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We present a method for performing path integral molecular dynamics (PIMD) simulations for fermions and address its sign problem. PIMD simulations are widely used for studying many-body quantum systems at thermal equilibrium. However, they…

Chemical Physics · Physics 2020-05-07 Barak Hirshberg , Michele Invernizzi , Michele Parrinello

Non-negative matrix factorization (NMF) is an important tool in signal processing and widely used to separate mixed sources into their components. Algorithms for NMF require that the user choose the number of components in advance, and if…

Machine Learning · Computer Science 2025-01-10 Youdong Guo , Timothy E. Holy

Accurate thermodynamic simulations of correlated fermions using path integral Monte Carlo (PIMC) methods are of paramount importance for many applications such as the description of ultracold atoms, electrons in quantum dots, and warm-dense…

Computational Physics · Physics 2021-02-03 Tobias Dornheim , Michele Invernizzi , Jan Vorberger , Barak Hirshberg

We develop an efficient alternating framework for learning a generalized version of Factorization Machine (gFM) on steaming data with provable guarantees. When the instances are sampled from $d$ dimensional random Gaussian vectors and the…

Machine Learning · Statistics 2016-10-27 Ming Lin , Jieping Ye

We have proposed new algorithms for the numerical integration of the equations of motion for classical spin systems. In close analogy to symplectic integrators for Hamiltonian equations of motion used in Molecular Dynamics these algorithms…

Statistical Mechanics · Physics 2009-10-31 M. Krech , Alex Bunker , D. P. Landau

This paper proposes a novel Generalized Non-Standard Finite Difference (GNSFD) scheme for the numerical solution of a class of fractional partial differential equations (FrPDEs). The formulation of the method is grounded in optimization and…

Numerical Analysis · Mathematics 2025-09-17 Devank Mishra , Sheerin Kayenat , Amit K. Verma

The equations of motion of a single particle subject to an arbitrary electric and a static magnetic field form a Poisson system. We present a second-order time integration method which preserves well the Poisson structure and compare it to…

Numerical Analysis · Mathematics 2016-01-06 Christian Knapp , Alexander Kendl , Antti Koskela , Alexander Ostermann

Product formula methods, particularly the second-order Suzuki decomposition, are an important tool for simulating quantum dynamics on quantum computers due to their simplicity and unitarity preservation. While higher-order schemes have been…

Quantum Physics · Physics 2025-05-08 Matthew A Lane , Dan E Browne

In this paper, we present a flow-based method for global optimization of continuous Sobolev functions, called Stein Boltzmann Sampling (SBS). SBS initializes uniformly a number of particles representing candidate solutions, then uses the…

Optimization and Control · Mathematics 2025-02-21 Gaëtan Serré , Argyris Kalogeratos , Nicolas Vayatis

Motivated by the need for analysing large spatio-temporal panel data, we introduce a novel dimensionality reduction methodology for $n$-dimensional random fields observed across a number $S$ spatial locations and $T$ time periods. We call…

Methodology · Statistics 2023-12-06 Matteo Barigozzi , Davide La Vecchia , Hang Liu

An approach is proposed to improve the efficiency of fourth-order algorithms for numerical integration of the equations of motion in molecular dynamics simulations. The approach is based on an extension of the decomposition scheme by…

Statistical Mechanics · Physics 2009-11-07 Igor Omelyan , Ihor Mryglod , Reinhard Folk

The exchange antisymmetry between identical fermions gives rise to the well known fermion sign problem, in the form of large cancellation between positive and negative contribution to the partition function, making any simulation methods…

Quantum Gases · Physics 2022-08-31 Xiong Yunuo , Xiong Hongwei

The variational inclusion of spin-orbit coupling in self-consistent field (SCF) calculations requires a generalised two-component framework, which permits the single-determinant wave function to completely break spin symmetry. The…

Chemical Physics · Physics 2023-03-29 Shadan Ghassemi Tabrizi , R. Rodríguez-Guzmán , Carlos A. Jiménez-Hoyos

In the realm of statistical learning, the increasing volume of accessible data and increasing model complexity necessitate robust methodologies. This paper explores two branches of robust Bayesian methods in response to this trend. The…

Methodology · Statistics 2024-12-02 Masahiro Tanaka

We present GOFMM (geometry-oblivious FMM), a novel method that creates a hierarchical low-rank approximation, "compression," of an arbitrary dense symmetric positive definite (SPD) matrix. For many applications, GOFMM enables an approximate…

Numerical Analysis · Computer Science 2017-07-04 Chenhan D. Yu , James Levitt , Severin Reiz , George Biros

The Poisson-Boltzmann model is an effective and popular approach for modeling solvated biomolecules in continuum solvent with dissolved electrolytes. In this paper, we report our recent work in developing a Galerkin boundary integral method…

Computational Physics · Physics 2021-10-27 Jiahui Chen , Johannes Tausch , Weihua Geng

Although many techniques have been applied to matrix factorization (MF), they may not fully exploit the feature structure. In this paper, we incorporate the grouping effect into MF and propose a novel method called Robust Matrix…

Machine Learning · Computer Science 2021-07-09 Haiyan Jiang , Shuyu Li , Luwei Zhang , Haoyi Xiong , Dejing Dou

We propose a unified framework to speed up the existing stochastic matrix factorization (SMF) algorithms via variance reduction. Our framework is general and it subsumes several well-known SMF formulations in the literature. We perform a…

Machine Learning · Statistics 2017-05-23 Renbo Zhao , William B. Haskell , Jiashi Feng

We introduce an algorithm based on Generalized Dual Method (GDM) to efficiently study the dynamics of a particle in quasiperiodic environments without the need to use periodic approximations or to save the information of the vertices that…

Chaotic Dynamics · Physics 2022-04-28 Alan Rodrigo Mendoza Sosa , Atahualpa S. Kraemer

We propose the regularized compressed double factorization (RC-DF) method to classically compute compressed representations of molecular Hamiltonians that enable efficient simulation with noisy intermediate scale (NISQ) and error corrected…