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Systematic ablations are essential to attribute performance gains in AI Virtual Cells, yet they are rarely performed because biological repositories are under-standardized and tightly coupled to domain-specific data and formats. While…

Artificial Intelligence · Computer Science 2026-05-01 Xue Xia , Chengkai Yao , Mingyu Tsoi , Xinjie Mao , Wenxuan Huang , Jiaqi Wei , Hao Wu , Cheng Tan , Lang Yu , Yuejin Yang , Mengdi Liu , Siqi Sun , Zhangyang Gao

The integration of Large Language Models (LLMs) into software engineering has revolutionized code generation, enabling unprecedented productivity through promptware and autonomous AI agents. However, this transformation introduces…

Software Engineering · Computer Science 2025-08-19 Satyam Kumar Navneet , Joydeep Chandra

Software systems built from versioned AI components increasingly need lifecycle-time governance: when a capability module evolves into a new version, the hosting system must decide whether the new version may be activated safely, under what…

Robotics · Computer Science 2026-05-27 Xue Qin , Simin Luan , John See , Zeyd Boukhers , Cong Yang , Zhijun Li

The integration of Formal Verification tools with Large Language Models (LLMs) offers a path to scale software verification beyond manual workflows. However, current methods remain unreliable: without a solid theoretical footing, the…

Artificial Intelligence · Computer Science 2025-12-18 PIerre Dantas , Lucas Cordeiro , Youcheng Sun , Waldir Junior

Large language models (LLMs) for automatic code generation have achieved breakthroughs in several programming tasks. Their advances in competition-level programming problems have made them an essential pillar of AI-assisted pair…

Cryptography and Security · Computer Science 2023-10-24 Hossein Hajipour , Keno Hassler , Thorsten Holz , Lea Schönherr , Mario Fritz

Modern Large Language Model (LLM) systems are assembled from third-party artifacts such as pre-trained weights, fine-tuning adapters, datasets, dependency packages, and container images, fetched through automated pipelines. This speed comes…

Cryptography and Security · Computer Science 2026-04-01 Zhuoran Tan , Jeremy Singer , Christos Anagnostopoulos

MerLean-Prover is an end-to-end Lean4 theorem prover that replaces sorry declarations with kernel-checkable proofs. It is built from three agent types (Planning, Check, and Lean) composed by a recursive outer loop whose unit of revision is…

Logic in Computer Science · Computer Science 2026-05-28 Jinzheng Li , Zeru Zhu , Yuanjie Ren

AI-powered programming assistants are increasingly gaining popularity, with GitHub Copilot alone used by over a million developers worldwide. These tools are far from perfect, however, producing code suggestions that may be incorrect in…

Human-Computer Interaction · Computer Science 2024-02-26 Kasra Ferdowsi , Ruanqianqian Huang , Michael B. James , Nadia Polikarpova , Sorin Lerner

Prediction-based decision-making systems are becoming increasingly prevalent in various domains. Previous studies have demonstrated that such systems are vulnerable to runaway feedback loops, e.g., when police are repeatedly sent back to…

Computers and Society · Computer Science 2024-01-05 Nicolò Pagan , Joachim Baumann , Ezzat Elokda , Giulia De Pasquale , Saverio Bolognani , Anikó Hannák

We introduce a universal policy wrapper for reinforcement learning agents that ensures formal goal-reaching guarantees. In contrast to standard reinforcement learning algorithms that excel in performance but lack rigorous safety assurances,…

Machine Learning · Computer Science 2025-05-20 Anton Bolychev , Georgiy Malaniya , Grigory Yaremenko , Anastasia Krasnaya , Pavel Osinenko

Black-box optimization is often encountered for decision-making in complex systems management, where the knowledge of system is limited. Under these circumstances, it is essential to balance the utilization of new information with…

Computation · Statistics 2025-01-15 Teng Lian , Jian-Qiang Hu , Yuhang Wu , Zeyu Zheng

AI is poised to revolutionize telecommunication networks by boosting efficiency, automation, and decision-making. However, the black-box nature of most AI models introduces substantial risk, possibly deterring adoption by network operators.…

Information Theory · Computer Science 2025-04-29 Osvaldo Simeone , Sangwoo Park , Matteo Zecchin

Background. Reproducibility is essential to the scientific method, but reproduction is often a laborious task. Recent works have attempted to automate this process and relieve researchers of this workload. However, due to varying…

Computers and Society · Computer Science 2026-01-09 Thijs Snelleman , Peter Lundestad Lawrence , Holger H. Hoos , Odd Erik Gundersen

This position paper argues that standardized item-level benchmark data should become the default infrastructure for AI evaluation. Current evaluations suffer from underspecified item selection, construct misalignment, and poor…

Artificial Intelligence · Computer Science 2026-05-25 Han Jiang , Susu Zhang , Dongyao Zhu , Yuzhuo Bai , Sang T. Truong , Xiaoyuan Yi , Sanmi Koyejo , Xing Xie , Ziang Xiao

Multi-agent systems achieve state-of-the-art outcomes through peer collaboration. However, when an agent in the pipeline silently drops a constraint, the system's final output may look correct even though the reasoning chain was quietly…

The key to performance optimization of a program is to decide correctly when a certain transformation should be applied by a compiler. This is an ideal opportunity to apply machine-learning models to speed up the tuning process; while this…

Following the rapid increase in Artificial Intelligence (AI) capabilities in recent years, the AI community has voiced concerns regarding possible safety risks. To support decision-making on the safe use and development of AI systems, there…

Machine Learning · Computer Science 2025-04-01 Gil Gekker , Meirav Segal , Dan Lahav , Omer Nevo

Generative AI and Large Language Models (LLMs) hold promise for automating spreadsheet formula creation. However, due to hallucinations, bias and variable user skill, outputs obtained from generative AI cannot be assumed to be accurate or…

Human-Computer Interaction · Computer Science 2025-01-20 Simon Thorne

Empowering large language models to accurately express confidence in their answers is essential for trustworthy decision-making. Previous confidence elicitation methods, which primarily rely on white-box access to internal model information…

Computation and Language · Computer Science 2024-03-19 Miao Xiong , Zhiyuan Hu , Xinyang Lu , Yifei Li , Jie Fu , Junxian He , Bryan Hooi

AI services are known to have unstable behavior when subjected to changes in data, models or users. Such behaviors, whether triggered by omission or commission, lead to trust issues when AI works with humans. The current approach of…

Human-Computer Interaction · Computer Science 2023-02-21 Biplav Srivastava , Kausik Lakkaraju , Mariana Bernagozzi , Marco Valtorta