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We consider the task of representation learning for unsupervised segmentation of 3D voxel-grid biomedical images. We show that models that capture implicit hierarchical relationships between subvolumes are better suited for this task. To…

Computer Vision and Pattern Recognition · Computer Science 2021-10-27 Joy Hsu , Jeffrey Gu , Gong-Her Wu , Wah Chiu , Serena Yeung

Graph neural networks for heterogeneous graph embedding is to project nodes into a low-dimensional space by exploring the heterogeneity and semantics of the heterogeneous graph. However, on the one hand, most of existing heterogeneous graph…

Machine Learning · Computer Science 2022-12-01 Zezhi Shao , Yongjun Xu , Wei Wei , Fei Wang , Zhao Zhang , Feida Zhu

Trajectory similarity is a cornerstone of trajectory data management and analysis. Traditional similarity functions often suffer from high computational complexity and a reliance on specific distance metrics, prompting a shift towards deep…

Databases · Computer Science 2025-04-16 Jianing Si , Haitao Yuan , Nan Jiang , Minxiao Chen , Xiao Ma , Shangguang Wang

Concept Bottleneck Models (CBMs) have become a popular approach to enable interpretability in neural networks by constraining classifier inputs to a set of human-understandable concepts. While effective, current models embed concepts in…

Machine Learning · Computer Science 2026-05-13 Daniel Uyterlinde , Swasti Shreya Mishra , Pascal Mettes

Hyperbolic spaces, which have the capacity to embed tree structures without distortion owing to their exponential volume growth, have recently been applied to machine learning to better capture the hierarchical nature of data. In this…

Machine Learning · Computer Science 2021-03-18 Ryohei Shimizu , Yusuke Mukuta , Tatsuya Harada

The non-Euclidean geometry of hyperbolic spaces has recently garnered considerable attention in the realm of representation learning. Current endeavors in hyperbolic representation largely presuppose that the underlying hierarchies can be…

Machine Learning · Computer Science 2023-06-16 Menglin Yang , Min Zhou , Rex Ying , Yankai Chen , Irwin King

Artificial neural networks (ANNs) were inspired by the architecture and functions of the human brain and have revolutionised the field of artificial intelligence (AI). Inspired by studies on the latent geometry of the brain, in this…

Neurons and Cognition · Quantitative Biology 2025-02-04 Alexander Joseph , Nathan Francis , Meijke Balay

Recently, neural radiance fields (NeRF) have gained significant attention in the field of visual localization. However, existing NeRF-based approaches either lack geometric constraints or require extensive storage for feature matching,…

Computer Vision and Pattern Recognition · Computer Science 2025-03-11 Hongjia Zhai , Boming Zhao , Hai Li , Xiaokun Pan , Yijia He , Zhaopeng Cui , Hujun Bao , Guofeng Zhang

Learning generalizable self-supervised graph representations for downstream tasks is challenging. To this end, Contrastive Learning (CL) has emerged as a leading approach. The embeddings of CL are arranged on a hypersphere where similarity…

Machine Learning · Computer Science 2025-02-25 Yifei Zhang , Hao Zhu , Menglin Yang , Jiahong Liu , Rex Ying , Irwin King , Piotr Koniusz

Finding meaningful representations and distances of hierarchical data is important in many fields. This paper presents a new method for hierarchical data embedding and distance. Our method relies on combining diffusion geometry, a central…

Machine Learning · Computer Science 2023-05-31 Ya-Wei Eileen Lin , Ronald R. Coifman , Gal Mishne , Ronen Talmon

Understanding neural responses to visual stimuli remains challenging due to the inherent complexity of brain representations and the modality gap between neural data and visual inputs. Existing methods, mainly based on reducing neural…

Computer Vision and Pattern Recognition · Computer Science 2026-01-06 Weihang You , Hanqi Jiang , Yi Pan , Junhao Chen , Tianming Liu , Fei Dou

Hyperbolic networks have shown prominent improvements over their Euclidean counterparts in several areas involving hierarchical datasets in various domains such as computer vision, graph analysis, and natural language processing. However,…

Machine Learning · Computer Science 2022-06-09 Nurendra Choudhary , Chandan K. Reddy

Hyperbolic-spaces are better suited to represent data with underlying hierarchical relationships, e.g., tree-like data. However, it is often necessary to incorporate, through alignment, different but related representations meaningfully.…

Machine Learning · Statistics 2020-12-03 Andrés Hoyos-Idrobo

Learning embeddings of entities and relations existing in knowledge bases allows the discovery of hidden patterns in data. In this work, we examine the geometrical space's contribution to the task of knowledge base completion. We focus on…

Computation and Language · Computer Science 2019-08-20 Prodromos Kolyvakis , Alexandros Kalousis , Dimitris Kiritsis

The development of data-dependent heuristics and representations for biological sequences that reflect their evolutionary distance is critical for large-scale biological research. However, popular machine learning approaches, based on…

Quantitative Methods · Quantitative Biology 2021-10-13 Gabriele Corso , Rex Ying , Michal Pándy , Petar Veličković , Jure Leskovec , Pietro Liò

In practice, many medical datasets have an underlying taxonomy defined over the disease label space. However, existing classification algorithms for medical diagnoses often assume semantically independent labels. In this study, we aim to…

Computer Vision and Pattern Recognition · Computer Science 2022-09-14 Zhen Yu , Toan Nguyen , Yaniv Gal , Lie Ju , Shekhar S. Chandra , Lei Zhang , Paul Bonnington , Victoria Mar , Zhiyong Wang , Zongyuan Ge

In recent years, the task of weakly supervised audio-visual violence detection has gained considerable attention. The goal of this task is to identify violent segments within multimodal data based on video-level labels. Despite advances in…

Computer Vision and Pattern Recognition · Computer Science 2024-02-14 Xiaogang Peng , Hao Wen , Yikai Luo , Xiao Zhou , Keyang Yu , Ping Yang , Zizhao Wu

Hyperbolic space can naturally embed hierarchies, unlike Euclidean space. Hyperbolic Neural Networks (HNNs) exploit such representational power by lifting Euclidean features into hyperbolic space for classification, outperforming Euclidean…

Machine Learning · Computer Science 2022-05-17 Yunhui Guo , Xudong Wang , Yubei Chen , Stella X. Yu

Computer vision tasks such as image classification, image retrieval and few-shot learning are currently dominated by Euclidean and spherical embeddings, so that the final decisions about class belongings or the degree of similarity are made…

Computer Vision and Pattern Recognition · Computer Science 2020-04-01 Valentin Khrulkov , Leyla Mirvakhabova , Evgeniya Ustinova , Ivan Oseledets , Victor Lempitsky

The hyperbolic space, characterized by a constant negative curvature and exponentially expanding space, aligns well with the structural properties of heterogeneous graphs. However, although heterogeneous graphs inherently possess diverse…

Machine Learning · Computer Science 2025-06-23 Jongmin Park , Seunghoon Han , Won-Yong Shin , Sungsu Lim