Related papers: Turing patterns on non-fluctuating surfaces under …
We numerically study Turing patterns (TPs) on two-dimensional surfaces with a square boundary in ${\bf R}^3$ using a surface model for polymerized membranes. The variables used to describe the membranes correspond to two distinct degrees of…
We numerically study the anisotropic Turing patterns (TPs) of an activator-inhibitor system, focusing on anisotropic diffusion by using the Finsler geometry (FG) modeling technique. In the FG modeling prescription, the diffusion…
We study the dynamics of elastic interfaces-membranes-immersed in thermally excited fluids. The work contains three components: the development of a numerical method, a purely theoretical approach, and numerical simulation. In developing a…
We provide a method for calculating time-averaged stress fluctuations on surfaces in a viscous incompressible fluid at equilibrium. We assume that (i) the time-averaged fluctuating stress is balanced in equilibrium at each position and that…
For cellular functions like division and polarization, protein pattern formation driven by NTPase cycles is a central spatial control strategy. Operating far from equilibrium, no general theory links microscopic reaction networks and…
In this letter we propose a Turing model of the formation of patterns of visible light emission intensity in atmospheric pressure gas discharges. The electron density and the electron temperature take the roles of activator and inhibitor…
In this paper, we numerically study Turing patterns by the Finsler geometry (FG) modeling technique on thermally fluctuating triangular lattices, which are often used for modeling cell membranes or lipid membranes, focusing on the origin of…
It has been known for long that the fluctuation surface tension of membranes $r$, computed from the height fluctuation spectrum, is not equal to the bare surface tension $\sigma$ introduced in the Helfrich theory. In this work we relate…
Stress tensors are derived for the multiparticle collision dynamics algorithm, a particle-based mesoscale simulation method for fluctuating fluids, resembling those of atomistic or molecular systems. Systems with periodic boundary…
Torques on interfaces can be described by a divergence-free tensor which is fully encoded in the geometry. This tensor consists of two terms, one originating in the couple of the stress, the other capturing an intrinsic contribution due to…
In this work we investigate the effect of density dependent nonlinear diffusion on pattern formation in the Brusselator system. Through linear stability analysis of the basic solution we determine the Turing and the oscillatory instability…
Non-local and non-convex energies represent fundamental interacting effects regulating the complex behavior of many systems in biophysics and materials science. We study one dimensional, prototypical schemes able to represent the behavior…
Topological quantum and classical materials can exhibit robust properties that are protected against disorder, for example for noninteracting particles and linear waves. Here, we demonstrate how to construct topologically protected states…
This is the second of two articles on the study of a particle system model that exhibits a Turing instability type effect. About the hydrodynamic quations obtained in \cite{CSL17a}, we find conditions under which Turing instability occurs…
Three types of surface tensions can be defined for lipid membranes: the internal tension, $\sigma$, conjugated to the real membrane area in the Hamiltonian, the mechanical frame tension, $\tau$, conjugated to the projected area, and the…
This paper deals with the numerical modeling of transient mechanical waves in linear viscoelastic solids. Dissipation mechanisms are described using the generalized Zener model. No time convolutions are required thanks to the introduction…
We present a rotationally invariant viscous vertex model that accounts for both cortical and bulk dissipation of cells. The vanishing substrate-friction limit is enforced via Lagrange multipliers, which also provides a framework for…
Inhomogeneous fluids exhibit physical properties that are neither uniform nor isotropic. The pressure tensor is a case in point, key to the mechanical description of the interfacial region. Kirkwood and Buff, and later Irving and Kirkwood,…
We consider an incompressible viscous flow without surface tension in a finite- depth domain of three dimension, with free top boundary. This system is governed by a Naiver-Stokes equation in a moving domain and a transport equation for the…
Thin elastic sheets appear in systems ranging from graphene to biological membranes, where phenomena such as wrinkling, folding, and thermal fluctuations originate from geometric nonlinearities. These effects are treated within weakly…