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Magnetoencephalography (MEG) provides dynamic spatial-temporal insight of neural activities in the cortex. Because the number of possible sources is far greater than the number of MEG detectors, the proposition to localize sources directly…

Quantitative Methods · Quantitative Biology 2009-03-06 Hung-I Pai , Chih-Yuan Tseng , H. C. Lee

Recent development of neural implicit function has shown tremendous success on high-quality 3D shape reconstruction. However, most works divide the space into inside and outside of the shape, which limits their representing power to…

Computer Vision and Pattern Recognition · Computer Science 2024-04-10 Jianglong Ye , Yuntao Chen , Naiyan Wang , Xiaolong Wang

We propose a framework for jointly modeling the geometry and functionality in high dimensional functional surfaces. The proposed mixed effects model characterizes effects of subject-specific covariates and exogenous stimuli on functional…

Applications · Statistics 2023-02-10 Jingjing Zou , Chi-Hua Chen , John A. D. Aston

Brain MRI foundation models learn rich representations of anatomy, but interpreting what clinical information they encode remains an open problem. Standard sparse autoencoders (SAEs) suffer from severe feature collapse in deep transformer…

Computer Vision and Pattern Recognition · Computer Science 2026-05-05 Favour Nerrise , Lucy Yin , Mohammad H. Abbasi , Kilian M. Pohl , Ehsan Adeli

Current foundation models for electroencephalography (EEG) rely on architectures adapted from computer vision or natural language processing, typically treating neural signals as pixel grids or token sequences. This approach overlooks that…

Signal Processing · Electrical Eng. & Systems 2026-03-05 Zhisheng Chen , Yingwei Zhang , Qizhen Lan , Tianyu Liu , Huacan Wang , Yi Ding , Ziyu Jia , Ronghao Chen , Kun Wang , Xinliang Zhou

Decoding visual information from electroencephalography (EEG) has recently achieved promising results, primarily focusing on reconstructing two-dimensional (2D) images from brain activity. However, the reconstruction of three-dimensional…

Computer Vision and Pattern Recognition · Computer Science 2026-04-10 Emanuele Balloni , Emanuele Frontoni , Chiara Matti , Marina Paolanti , Roberto Pierdicca , Emiliano Santarnecchi

Spiral waves are ubiquitous signatures of non equilibrium dynamics, appearing across chemical, biological, and active systems. Yet, in many living systems these waves unfold on curved and folded surfaces whose geometry has rarely been…

Soft Condensed Matter · Physics 2026-01-19 Varun Venkatesh , Farzan Vafa , Martin Cramer Pedersen , Amin Doostmohammadi

Embedding graphs in continous spaces is a key factor in designing and developing algorithms for automatic information extraction to be applied in diverse tasks (e.g., learning, inferring, predicting). The reliability of graph embeddings…

Machine Learning · Computer Science 2023-11-30 Andrea Marinoni , Pietro Lio' , Alessandro Barp , Christian Jutten , Mark Girolami

Predicting disease states from functional brain connectivity is critical for the early diagnosis of severe neurodegenerative diseases such as Alzheimer's Disease and Parkinson's Disease. Existing studies commonly employ Graph Neural…

Machine Learning · Computer Science 2025-04-22 David Yang , Mostafa Abdelmegeed , John Modl , Minjeong Kim

Electroencephalography (EEG) is a non-invasive technique for recording brain electrical activity, widely used in brain-computer interface (BCI) and healthcare. Recent EEG foundation models trained on large-scale datasets have shown improved…

Machine Learning · Computer Science 2025-09-29 Yi Ding , Muyun Jiang , Weibang Jiang , Shuailei Zhang , Xinliang Zhou , Chenyu Liu , Shanglin Li , Yong Li , Cuntai Guan

Knowledge graph (KG) embeddings have shown great power in learning representations of entities and relations for link prediction tasks. Previous work usually embeds KGs into a single geometric space such as Euclidean space (zero curved),…

Machine Learning · Computer Science 2022-06-28 Zongsheng Cao , Qianqian Xu , Zhiyong Yang , Xiaochun Cao , Qingming Huang

Brain-computer interfaces (BCIs) offer transformative potential, but decoding neural signals presents significant challenges. The core premise of this paper is built around demonstrating methods to elucidate the underlying low-dimensional…

Machine Learning · Computer Science 2025-02-28 Benjamin J. Choi

The reconstruction of 3D objects from brain signals has gained significant attention in brain-computer interface (BCI) research. Current research predominantly utilizes functional magnetic resonance imaging (fMRI) for 3D reconstruction…

Graphics · Computer Science 2025-05-06 Xia Deng , Shen Chen , Jiale Zhou , Lei Li

A large number of surface-based analyses on brain imaging data adopt some specific brain atlases to better assess structural and functional changes in one or more brain regions. In these analyses, it is necessary to obtain an anatomically…

Image and Video Processing · Electrical Eng. & Systems 2019-10-01 Wen Zhang , Yalin Wang

We present Graph Random Neural Features (GRNF), a novel embedding method from graph-structured data to real vectors based on a family of graph neural networks. The embedding naturally deals with graph isomorphism and preserves the metric…

Machine Learning · Computer Science 2020-06-03 Daniele Zambon , Cesare Alippi , Lorenzo Livi

Conditional Neural Fields (CNFs) are increasingly being leveraged as continuous signal representations, by associating each data-sample with a latent variable that conditions a shared backbone Neural Field (NeF) to reconstruct the sample.…

The inductive bias of a graph neural network (GNN) is largely encoded in its specified graph. Latent graph inference relies on latent geometric representations to dynamically rewire or infer a GNN's graph to maximize the GNN's predictive…

Machine Learning · Computer Science 2025-03-11 Haitz Sáez de Ocáriz Borde , Anastasis Kratsios

Advances in neural operators have introduced discretization invariant surrogate models for PDEs on general geometries, yet many approaches struggle to encode local geometric structure and variable domains efficiently. We introduce enf2enf,…

Machine Learning · Computer Science 2025-09-29 Giovanni Catalani , Michael Bauerheim , Frédéric Tost , Xavier Bertrand , Joseph Morlier

Electroencephalography (EEG) is a non-invasive technique for recording brain activity, widely used in brain-computer interfaces, clinic, and healthcare. Traditional EEG deep models typically focus on specific dataset and task, limiting…

Signal Processing · Electrical Eng. & Systems 2025-09-03 Ang Li , Zikai Wang , Liuyin Yang , Zhenyu Wang , Tianheng Xu , Honglin Hu , Marc M. Van Hulle

Capturing dynamic spatiotemporal neural activity is essential for understanding large-scale brain mechanisms. Functional magnetic resonance imaging (fMRI) provides high-resolution cortical representations that form a strong basis for…

Image and Video Processing · Electrical Eng. & Systems 2026-04-01 Wanying Qu , Jianxiong Gao , Wei Wang , Yanwei Fu