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We introduce JAX MD, a software package for performing differentiable physics simulations with a focus on molecular dynamics. JAX MD includes a number of physics simulation environments, as well as interaction potentials and neural networks…

Computational Physics · Physics 2020-12-04 Samuel S. Schoenholz , Ekin D. Cubuk

Differentiable programming has emerged as a powerful paradigm in scientific computing, enabling automatic differentiation through simulation pipelines and naturally supporting both forward and inverse modeling. We present JAX-MPM, a…

Machine Learning · Computer Science 2025-09-30 Honghui Du , QiZhi He

Solving large dense linear systems and eigenvalue problems is a core requirement in many areas of scientific computing, but scaling these operations beyond a single GPU remains challenging within modern programming frameworks. While highly…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-01-22 Roeland Wiersema

Differentiable numerical simulations of physical systems have gained rising attention in the past few years with the development of automatic differentiation tools. This paper presents JAX-SSO, a differentiable finite element analysis…

Mathematical Software · Computer Science 2024-07-30 Gaoyuan Wu

The increasing number of processing elements and decreas- ing memory to core ratio in modern high-performance platforms makes efficient strong scaling a key requirement for numerical algorithms. In order to achieve efficient scalability on…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-01-14 Michael Lange , Gerard Gorman , Michele Weiland , Lawrence Mitchell , James Southern

Understanding shock-solid interactions remains a central challenge in compressiblefluiddynamics. WepresentJAX-Shock: afully-differentiable,GPU-accelerated, high-order shock-capturing solver for efficient simulation of the compressible…

Fluid Dynamics · Physics 2026-01-09 Bo Zhang

The trend towards highly parallel multi-processing is ubiquitous in all modern computer architectures, ranging from handheld devices to large-scale HPC systems; yet many applications are struggling to fully utilise the multiple levels of…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-07-19 Michael Lange , Gerard Gorman , Michele Weiland , Lawrence Mitchell , Xiaohu Guo , James Southern

We propose the use of automatic differentiation through the programming framework jax for accelerating a variety of analysis tasks throughout gravitational wave (GW) science. Firstly, we demonstrate that complete waveforms which cover the…

Instrumentation and Methods for Astrophysics · Physics 2023-02-13 Thomas D. P. Edwards , Kaze W. K. Wong , Kelvin K. H. Lam , Adam Coogan , Daniel Foreman-Mackey , Maximiliano Isi , Aaron Zimmerman

In mesh-based numerical simulations, sweep is an important computation pattern. During sweeping a mesh, computations on cells are strictly ordered by data dependencies in given directions. Due to such a serial order, parallelizing sweep is…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-28 Jie Yan , Zhang Yang , Aiqing Zhang , Zeyao Mo

Turbulent flows and fluid-structure interactions (FSI) are ubiquitous in scientific and engineering applications, but their accurate and efficient simulation remains a major challenge due to strong nonlinearities, multiscale interactions,…

Fluid Dynamics · Physics 2025-06-02 Xiantao Fan , Xinyang Liu , Meng Wang , Jian-Xun Wang

Solving complex fluid-structure interaction (FSI) problems, which are described by nonlinear partial differential equations, is crucial in various scientific and engineering applications. Traditional computational fluid dynamics based…

Computational Physics · Physics 2023-03-24 Xiantao Fan , Jian-Xun Wang

We present JAX-PF, an open-source, GPU-accelerated, and differentiable Phase Field (PF) software package, supporting both explicit and implicit time stepping schemes. Leveraging the modern computing architecture JAX, JAX-PF achieves high…

Computational Physics · Physics 2026-01-13 Fanglei Hu , Jiachen Guo , Stephen Niezgoda , Wing Kam Liu , Jian Cao

Differentiable simulators are an emerging concept with applications in several fields, from reinforcement learning to optimal control. Their distinguishing feature is the ability to calculate analytic gradients with respect to the input…

Machine Learning · Computer Science 2021-11-10 Antonio Stanziola , Simon R. Arridge , Ben T. Cox , Bradley E. Treeby

MiMiC is a framework for performing multiscale simulations in which loosely coupled external programs describe individual subsystems at different resolutions and levels of theory. To make it highly efficient and flexible, we adopt an…

The rapid development in computing technology has paved the way for directive-based programming models towards a principal role in maintaining software portability of performance-critical applications. Efforts on such models involve a least…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-04-28 Kazuaki Matsumura , Simon Garcia De Gonzalo , Antonio J. Peña

We present JaxPP, a system for efficiently scaling the training of large deep learning models with flexible pipeline parallelism. We introduce a seamless programming model that allows implementing user-defined pipeline schedules for…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-12-20 Anxhelo Xhebraj , Sean Lee , Hanfeng Chen , Vinod Grover

JAX-in-Cell is a fully electromagnetic, multispecies, and relativistic 1D3V Particle-in-Cell (PIC) framework implemented entirely in JAX. It provides a modern, Python-based alternative to traditional PIC frameworks. It leverages…

Plasma Physics · Physics 2025-12-16 Longyu Ma , Rogerio Jorge , Hongke Lu , Aaron Tran , Christopher Woolford

This project aims to advance differentiable fluid dynamics for hypersonic coupled flow over porous media, demonstrating the potential of automatic differentiation (AD)-based optimization for end-to-end solutions. Leveraging AD efficiently…

Fluid Dynamics · Physics 2024-07-01 Wenkang Wang , Xuanwei Zhang , Deniz Bezgin , Aaron Buhendwa , Xu Chu , Bernhard Weigand

Epithelial tissues dynamically reshape through local mechanical interactions among cells, a process well captured by vertex models. Yet their many tunable parameters make inference and optimization challenging, motivating computational…

We present a novel, JAX-powered implementation of a parametric component-separation method for CMB polarization data, explicitly designed to handle spatially varying foreground Spectral Energy Distributions (SEDs). The approach models this…

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