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Automated stomata detection and measuring are vital for understanding plant physiological performance and ecological functioning in global water and carbon cycles. Current methods are laborious, time-consuming, prone to bias, and limited in…

Tissues and Organs · Quantitative Biology 2024-04-04 Jiaxin Wang , Heidi J. Renninger , Qin Ma , Shichao Jin

Responding to rising global food security needs, precision agriculture and deep learning-based plant disease diagnosis have become crucial. Yet, deploying high-precision models on edge devices is challenging. Most lightweight networks use…

Computer Vision and Pattern Recognition · Computer Science 2025-09-05 Zongsen Qiu

Anomaly detection is a critical task in computer vision with profound implications for medical imaging, where identifying pathologies early can directly impact patient outcomes. While recent unsupervised anomaly detection approaches show…

Computer Vision and Pattern Recognition · Computer Science 2026-03-03 Le Dong , Qinzhong Tan , Chunlei Li , Jingliang Hu , Yilei Shi , Weisheng Dong , Xiao Xiang Zhu , Lichao Mou

Early diagnosis of plant diseases is critical for global food safety, yet most AI solutions lack the generalization required for real-world agricultural diversity. These models are typically constrained to specific species, failing to…

Computer Vision and Pattern Recognition · Computer Science 2025-08-26 Saif Ur Rehman Khan , Muhammad Nabeel Asim , Sebastian Vollmer , Andreas Dengel

Sorghum is a globally important cereal grown widely in water-limited and stress-prone regions. Its strong drought tolerance makes it a priority crop for climate-resilient agriculture. Improving water-use efficiency in sorghum requires…

Computer Vision and Pattern Recognition · Computer Science 2026-02-03 Zhongtian Huang , Zhi Chen , Zi Huang , Xin Yu , Daniel Smith , Chaitanya Purushothama , Erik Van Oosterom , Alex Wu , William Salter , Yan Li , Scott Chapman

The advancement of Spatial Transcriptomics (ST) has facilitated the spatially-aware profiling of gene expressions based on histopathology images. Although ST data offers valuable insights into the micro-environment of tumors, its…

Computer Vision and Pattern Recognition · Computer Science 2024-12-23 Hongyi Wang , Xiuju Du , Jing Liu , Shuyi Ouyang , Yen-Wei Chen , Lanfen Lin

Intrinsically disordered regions of proteins play a crucial role in cell signaling and drug discovery. However, their high structural flexibility makes accurate residue-level prediction challenging. Existing methods often rely on…

Neural and Evolutionary Computing · Computer Science 2026-03-09 Shaokuan Wang , Pengshan Cui , Yining Qian , An-Yang Lu , Xianpeng Wang

Addressing the current lack of a standardized habitat classification system for cultivated land ecosystems, incomplete coverage of the habitat types, and the inability of existing models to effectively integrate semantic and texture…

Computer Vision and Pattern Recognition · Computer Science 2025-11-27 Kesong Zheng , Zhi Song , Peizhou Li , Shuyi Yao , Zhenxing Bian

Navigating the complex landscape of single-cell transcriptomic data presents significant challenges. Central to this challenge is the identification of a meaningful representation of high-dimensional gene expression patterns that sheds…

Quantitative Methods · Quantitative Biology 2023-12-13 Mu Qiao

Fine-tuning plays a crucial role in adapting models to downstream tasks with minimal training efforts. However, the rapidly increasing size of foundation models poses a daunting challenge for accommodating foundation model fine-tuning in…

Machine Learning · Computer Science 2025-04-18 Shiwei Ding , Lan Zhang , Zhenlin Wang , Giuseppe Ateniese , Xiaoyong Yuan

In the field of image-based drug discovery, capturing the phenotypic response of cells to various drug treatments and perturbations is a crucial step. However, existing methods require computationally extensive and complex multi-step…

Machine Learning · Computer Science 2025-02-28 Bo Li , Bob Zhang , Chengyang Zhang , Minghao Zhou , Weiliang Huang , Shihang Wang , Qing Wang , Mengran Li , Yong Zhang , Qianqian Song

Fluorescence molecular tomography (FMT) is a sensitive optical imaging technology widely used in biomedical research. However, the ill-posedness of the inverse problem poses a huge challenge to FMT reconstruction. Although end-to-end deep…

Image and Video Processing · Electrical Eng. & Systems 2025-03-18 Peng Zhang , Qianqian Xue , Xingyu Liu , Guanglei Zhang , Wenjian Wang , Jiye Liang

Segmentation of plant point clouds to obtain high-precise morphological traits is essential for plant phenotyping. Although the fast development of deep learning has boosted much research on segmentation of plant point clouds, previous…

Computer Vision and Pattern Recognition · Computer Science 2024-01-23 Ruiming Du , Zhihong Ma , Pengyao Xie , Yong He , Haiyan Cen

Shape measures have emerged as promising descriptors of white matter tractography, offering complementary insights into anatomical variability and associations with cognitive and clinical phenotypes. However, conventional methods for…

Image and Video Processing · Electrical Eng. & Systems 2025-10-22 Yui Lo , Yuqian Chen , Dongnan Liu , Leo Zekelman , Jarrett Rushmore , Yogesh Rathi , Nikos Makris , Alexandra J. Golby , Fan Zhang , Weidong Cai , Lauren J. O'Donnell

Reliable plant species and damage segmentation for herbicide field research trials requires models that can withstand substantial real-world variation across seasons, geographies, devices, and sensing modalities. Most deep learning…

Computer Vision and Pattern Recognition · Computer Science 2026-04-13 Artzai Picon , Itziar Eguskiza , Daniel Mugica , Javier Romero , Carlos Javier Jimenez , Eric White , Gabriel Do-Lago-Junqueira , Christian Klukas , Ramon Navarra-Mestre

Medical image analysis plays a pivotal role in the early diagnosis of diseases such as skin lesions. However, the scarcity of data and the class imbalance significantly hinder the performance of deep learning models. We propose a novel…

Image and Video Processing · Electrical Eng. & Systems 2025-07-29 Zhaobin Xu

Radio-interferometric (RI) imaging entails solving high-resolution high-dynamic range inverse problems from large data volumes. Recent image reconstruction techniques grounded in optimization theory have demonstrated remarkable capability…

Instrumentation and Methods for Astrophysics · Physics 2024-05-02 Amir Aghabiglou , Chung San Chu , Arwa Dabbech , Yves Wiaux

This work addresses the challenge of high-quality surface normal estimation from monocular colored inputs (i.e., images and videos), a field which has recently been revolutionized by repurposing diffusion priors. However, previous attempts…

Computer Vision and Pattern Recognition · Computer Science 2024-06-25 Chongjie Ye , Lingteng Qiu , Xiaodong Gu , Qi Zuo , Yushuang Wu , Zilong Dong , Liefeng Bo , Yuliang Xiu , Xiaoguang Han

Recent advances in multi-modal AI have demonstrated promising potential for generating the currently expensive spatial transcriptomics (ST) data directly from routine histology images, offering a means to reduce the high cost and…

Computer Vision and Pattern Recognition · Computer Science 2025-08-21 Junchao Zhu , Ruining Deng , Junlin Guo , Tianyuan Yao , Juming Xiong , Chongyu Qu , Mengmeng Yin , Yu Wang , Shilin Zhao , Haichun Yang , Daguang Xu , Yucheng Tang , Yuankai Huo

Accurate and timely identification of plant leaf diseases is essential for resilient and sustainable agriculture, yet most deep learning approaches rely on large annotated datasets and computationally intensive models that are unsuitable…

Computer Vision and Pattern Recognition · Computer Science 2025-12-16 Anika Islam , Tasfia Tahsin , Zaarin Anjum , Md. Bakhtiar Hasan , Md. Hasanul Kabir
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