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Recent advancements in deep learning for medical image segmentation are often limited by the scarcity of high-quality training data.While diffusion models provide a potential solution by generating synthetic images, their effectiveness in…

Computer Vision and Pattern Recognition · Computer Science 2025-07-02 Jianhao Xie , Ziang Zhang , Zhenyu Weng , Yuesheng Zhu , Guibo Luo

Thin leaves, fine stems, self-occlusion, non-rigid and slowly changing structures make plants difficult for three-dimensional (3D) scanning and reconstruction -- two critical steps in automated visual phenotyping. Many current solutions…

Computer Vision and Pattern Recognition · Computer Science 2017-02-28 Chuong V Nguyen , Jurgen Fripp , David R Lovell , Robert Furbank , Peter Kuffner , Helen Daily , Xavier Sirault

Pancreas segmentation in medical image processing is a persistent challenge due to its small size, low contrast against adjacent tissues, and significant topological variations. Traditional level set methods drive boundary evolution using…

Computer Vision and Pattern Recognition · Computer Science 2025-11-04 Yue Gou , Fanghui Song , Yuming Xing , Shengzhu Shi , Zhichang Guo , Boying Wu

The precise characterization of plant morphology provides valuable insights into plant environment interactions and genetic evolution. A key technology for extracting this information is 3D segmentation, which delineates individual plant…

Computer Vision and Pattern Recognition · Computer Science 2025-09-09 Ruiming Du , Guangxun Zhai , Tian Qiu , Yu Jiang

Complex biological networks are fundamental to biomedical science, capturing interactions among molecules, cells, genes, and tissues. Deciphering these networks is critical for understanding health and disease, yet their scale and…

Machine Learning · Computer Science 2025-12-09 Sakib Mostafa , Lei Xing , Md. Tauhidul Islam

In recent years, Denoising Diffusion Models have demonstrated remarkable success in generating semantically valuable pixel-wise representations for image generative modeling. In this study, we propose a novel end-to-end framework, called…

Image and Video Processing · Electrical Eng. & Systems 2023-03-21 Zhaohu Xing , Liang Wan , Huazhu Fu , Guang Yang , Lei Zhu

Face personalization aims to insert specific faces, taken from images, into pretrained text-to-image diffusion models. However, it is still challenging for previous methods to preserve both the identity similarity and editability due to…

Computer Vision and Pattern Recognition · Computer Science 2024-03-11 Kaede Shiohara , Toshihiko Yamasaki

Point-based cell detection (PCD), which pursues high-performance cell sensing under low-cost data annotation, has garnered increased attention in computational pathology community. Unlike mainstream PCD methods that rely on intermediate…

Computer Vision and Pattern Recognition · Computer Science 2023-08-29 Zhongyi Shui , Sunyi Zheng , Chenglu Zhu , Shichuan Zhang , Xiaoxuan Yu , Honglin Li , Jingxiong Li , Pingyi Chen , Lin Yang

Reinforcement learning with stochastic optimal control offers a promising framework for diffusion fine-tuning, where a pre-trained diffusion model is optimized to generate paths that lead to a reward-tilted distribution. While these…

Machine Learning · Computer Science 2025-09-30 Sophia Tang , Yuchen Zhu , Molei Tao , Pranam Chatterjee

Automated cell segmentation in microscopy images is essential for biomedical research, yet conventional methods are labor-intensive and prone to error. While deep learning-based approaches have proven effective, they often require large…

Computer Vision and Pattern Recognition · Computer Science 2024-11-20 Rüveyda Yilmaz , Kaan Keven , Yuli Wu , Johannes Stegmaier

Accurate estimation of wheat spike volume is important for yield component analysis and stress resilience assessment, yet field-based measurement remains challenging. Active 3D sensing methods such as Light Detection and Ranging (LiDAR) or…

Computer Vision and Pattern Recognition · Computer Science 2026-05-21 Olivia Zumsteg , Jannis Widmer , Yann Bourdé , Norbert Kirchgessner , Andreas Hund , Lukas Roth , Paraskevi Nousi

Unified multimodal models aim to integrate understanding and generation within a single framework, yet bridging the gap between discrete semantic reasoning and high-fidelity visual synthesis remains challenging. We present MammothModa2…

Computer Vision and Pattern Recognition · Computer Science 2025-11-25 Tao Shen , Xin Wan , Taicai Chen , Rui Zhang , Junwen Pan , Dawei Lu , Fanding Lei , Zhilin Lu , Yunfei Yang , Chen Cheng , Qi She , Chang Liu , Zhenbang Sun

We present Farm3D, a method for learning category-specific 3D reconstructors for articulated objects, relying solely on "free" virtual supervision from a pre-trained 2D diffusion-based image generator. Recent approaches can learn a…

Computer Vision and Pattern Recognition · Computer Science 2024-05-15 Tomas Jakab , Ruining Li , Shangzhe Wu , Christian Rupprecht , Andrea Vedaldi

Accurate, noninvasive detection of isocitrate dehydrogenase (IDH) mutation is essential for effective glioma management. Traditional methods rely on invasive tissue sampling, which may fail to capture a tumor's spatial heterogeneity. While…

Computer Vision and Pattern Recognition · Computer Science 2025-10-01 Somayeh Farahani , Marjaneh Hejazi , Antonio Di Ieva , Sidong Liu

Instance segmentation is an important task for biomedical and biological image analysis. Due to the complicated background components, the high variability of object appearances, numerous overlapping objects, and ambiguous object…

Computer Vision and Pattern Recognition · Computer Science 2021-02-24 Dongnan Liu , Donghao Zhang , Yang Song , Heng Huang , Weidong Cai

Data-driven predictive methods which can efficiently and accurately transform protein sequences into biologically active structures are highly valuable for scientific research and medical development. Determining accurate folding landscape…

Despite its success in image synthesis, we observe that diffusion probabilistic models (DPMs) often lack contextual reasoning ability to learn the relations among object parts in an image, leading to a slow learning process. To solve this…

Computer Vision and Pattern Recognition · Computer Science 2024-02-22 Shanghua Gao , Pan Zhou , Ming-Ming Cheng , Shuicheng Yan

The advancement of Spatial Transcriptomics (ST) has facilitated the spatially-aware profiling of gene expressions based on histopathology images. Although ST data offers valuable insights into the micro-environment of tumors, its…

Computer Vision and Pattern Recognition · Computer Science 2024-01-25 Hongyi Wang , Xiuju Du , Jing Liu , Shuyi Ouyang , Yen-Wei Chen , Lanfen Lin

Phenotype segmentation is pivotal in analysing visual features of living organisms, enhancing our understanding of their characteristics. In the context of oysters, meat quality assessment is paramount, focusing on shell, meat, gonad, and…

Computer Vision and Pattern Recognition · Computer Science 2025-01-22 Wenli Yang , Yanyu Chen , Andrew Trotter , Byeong Kang

We present Point2SSM, a novel unsupervised learning approach for constructing correspondence-based statistical shape models (SSMs) directly from raw point clouds. SSM is crucial in clinical research, enabling population-level analysis of…

Computer Vision and Pattern Recognition · Computer Science 2024-01-26 Jadie Adams , Shireen Elhabian