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We explore the complex dynamical behavior of two simple predator-prey models of biological coevolution that on the ecological level account for interspecific and intraspecific competition, as well as adaptive foraging behavior. The…

Populations and Evolution · Quantitative Biology 2009-11-28 Per Arne Rikvold

The Moran process is a classic stochastic process that models the rise and takeover of novel traits in network-structured populations. In biological terms, a set of mutants, each with fitness $m\in(0,\infty)$ invade a population of…

Data Structures and Algorithms · Computer Science 2024-05-14 Petros Petsinis , Andreas Pavlogiannis , Josef Tkadlec , Panagiotis Karras

The probability that an advantageous mutant rises to fixation in a viral quasispecies is investigated in the framework of multi-type branching processes. Whether fixation is possible depends on the overall growth rate of the quasispecies…

Biological Physics · Physics 2016-09-08 Claus O. Wilke

Cooperation is ubiquitous across all levels of biological systems ranging from microbial communities to human societies. It, however, seemingly contradicts the evolutionary theory, since cooperators are exploited by free-riders and thus are…

Populations and Evolution · Quantitative Biology 2019-09-23 Yunming Xiao , Bin Wu

We investigate the large population dynamics of a family of stochastic particle systems with three-state cyclic individual behaviour and parameter-dependent transition rates. On short time scales, the dynamics turns out to be approximated…

Probability · Mathematics 2022-05-10 Julien Barré , Bastien Fernandez , Grégoire Panel

Stochastic differential equations play an important role in various applications when modeling systems that have either random perturbations or chaotic dynamics at faster time scales. The time evolution of the probability distribution of a…

Numerical Analysis · Mathematics 2022-11-11 Yao Li , Caleb Meredith

Stable matching is a fundamental area with many practical applications, such as centralised clearinghouses for school choice or job markets. Recent work has introduced the paradigm of near-feasibility in capacitated matching settings, where…

Computer Science and Game Theory · Computer Science 2026-02-12 Frederik Glitzner

Populations evolve by accumulating advantageous mutations. Every population has some spatial structure that can be modeled by an underlying network. The network then influences the probability that new advantageous mutations fixate.…

Populations and Evolution · Quantitative Biology 2024-01-29 Jakub Svoboda , Soham Joshi , Josef Tkadlec , Krishnendu Chatterjee

We provide elementary proofs of several results concerning the possible outcomes arising from a fixed profile within the class of positional voting systems. Our arguments enable a simple and explicit construction of paradoxical profiles,…

Combinatorics · Mathematics 2020-08-17 Jacqueline Anderson , Brian Camara , John Pike

Understanding if and how mutants reach fixation in populations is an important question in evolutionary biology. We study the impact of population growth has on the success of mutants. To systematically understand the effects of growth we…

Populations and Evolution · Quantitative Biology 2017-03-29 Peter Ashcroft , Cassandra E. R. Smith , Matthew Garrod , Tobias Galla

We examine birth--death processes with state dependent transition probabilities and at least one absorbing boundary. In evolution, this describes selection acting on two different types in a finite population where reproductive events occur…

Populations and Evolution · Quantitative Biology 2010-10-12 Philipp M. Altrock , Chaytanya S. Gokhale , Arne Traulsen

We investigate the most probable phase portrait (MPPP) of a stochastic single-species model with the Allee effect using the non-local Fokker-Planck equation. This stochastic model is driven by non-Gaussian as well as Gaussian noise, and it…

Dynamical Systems · Mathematics 2023-02-03 Almaz Tesfay , Shenglan Yuan , Daniel Tesfay , James Brannan

Stable matchings have been studied extensively in social choice literature. The focus has been mostly on integral matchings, in which the nodes on the two sides are wholly matched. A fractional matching, which is a convex combination of…

Computer Science and Game Theory · Computer Science 2022-04-20 Shivika Narang , Y Narahari

We investigate the stochastic dynamics of entities which are confined to a set of islands, between which they migrate. They are assumed to be one of two types, and in addition to migration, they also reproduce and die. Systems which fall…

Statistical Mechanics · Physics 2014-04-02 George W. A. Constable , Alan J. McKane

Hypergraphs have been a useful tool for analyzing population dynamics such as opinion formation and the public goods game occurring in overlapping groups of individuals. In the present study, we propose and analyze evolutionary dynamics on…

Physics and Society · Physics 2023-10-16 Ruodan Liu , Naoki Masuda

We investigate the process of fixation of advantageous mutations in an asexual population. We assume that the effect of each beneficial mutation is exponentially distributed with mean value $\omega_{med}=1/\beta$. The model also considers…

Populations and Evolution · Quantitative Biology 2009-11-10 Viviane M. de Oliveira , Paulo R. A. Campos

Spatially extended population dynamics models that incorporate intrinsic noise serve as case studies for the role of fluctuations and correlations in biological systems. Including spatial structure and stochastic noise in predator-prey…

Statistical Mechanics · Physics 2018-01-09 Ulrich Dobramysl , Mauro Mobilia , Michel Pleimling , Uwe C. Täuber

In this letter, we investigate the population dynamics in a May-Leonard formulation of the rock-paper-scissors game in which one or two species, which we shall refer to as "weak", have a reduced predation or reproduction probability. We…

Populations and Evolution · Quantitative Biology 2021-08-11 P. P. Avelino , B. F. de Oliveira , R. S. Trintin

In genetics the Moran model describes the neutral evolution of a bi-allelic gene in a population of haploid individuals subjected to mutations. We show in this paper that this model can be mapped into an influence dynamical process on…

Populations and Evolution · Quantitative Biology 2015-03-17 Marcus A. M. de Aguiar , Yaneer Bar-Yam

Revealing hidden dynamics from the stochastic data is a challenging problem as randomness takes part in the evolution of the data. The problem becomes exceedingly complex when the trajectories of the stochastic data are absent in many…

Numerical Analysis · Mathematics 2024-02-02 Liwei Lu , Zhijun Zeng , Yan Jiang , Yi Zhu , Pipi Hu