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Large Language Models (LLMs) are increasingly adopted as conversational assistants in genomics, where they are mainly used to reason over biological knowledge, annotations, and analysis outputs through natural language interfaces. However,…

Genomics · Quantitative Biology 2026-04-08 Weicai Long , Yusen Hou , Junning Feng , Houcheng Su , Shuo Yang , Donglin Xie , Yanlin Zhang

LLMs have shown impressive progress in natural language processing. However, they still face significant challenges in TableQA, where real-world complexities such as diverse table structures, multilingual data, and domain-specific reasoning…

Computation and Language · Computer Science 2025-09-23 Junnan Zhu , Jingyi Wang , Bohan Yu , Xiaoyu Wu , Junbo Li , Lei Wang , Nan Xu

Humans constantly reason about 3D proximity, the relations between their body and surrounding objects, to guide perception and action in daily life. Whether multimodal large language models (MLLMs) can perform such embodied 3D reasoning…

Computer Vision and Pattern Recognition · Computer Science 2026-05-27 Jinzhao Li , Yinuo Chen , Dongxu Piao , Panwang Pan , Yifan Yu , Dong Wang , Honglei Yan , Liang Yue , Shaofei Wang , Yixin Chen , Siyuan Huang , Miao Liu

Vision-Language Models (VLMs) have emerged as a promising approach to address the data scarcity challenge in robotics, enabling the development of generalizable visuomotor control policies. While models like OpenVLA showcase the potential…

Scientific research demands sophisticated reasoning over multimodal data, a challenge especially prevalent in biology. Despite recent advances in multimodal large language models (MLLMs) for AI-assisted research, existing multimodal…

Large vision-language models (LVLMs) have demonstrated remarkable achievements, yet the generation of non-factual responses remains prevalent in fact-seeking question answering (QA). Current multimodal fact-seeking benchmarks primarily…

Computation and Language · Computer Science 2025-03-11 Yanling Wang , Yihan Zhao , Xiaodong Chen , Shasha Guo , Lixin Liu , Haoyang Li , Yong Xiao , Jing Zhang , Qi Li , Ke Xu

Large Multimodal Models (LMMs) have achieved strong performance across a range of vision and language tasks. However, their spatial reasoning capabilities are under-investigated. In this paper, we construct a novel VQA dataset, Spatial-MM,…

Computer Vision and Pattern Recognition · Computer Science 2024-11-12 Fatemeh Shiri , Xiao-Yu Guo , Mona Golestan Far , Xin Yu , Gholamreza Haffari , Yuan-Fang Li

Reward Models (RMs), vital for large model alignment, are underexplored for complex embodied tasks like Embodied Question Answering (EQA) where nuanced evaluation of agents' spatial, temporal, and logical understanding is critical yet not…

Machine Learning · Computer Science 2025-06-13 Yuhang Chen , Zhen Tan , Tianlong Chen

Long-horizon planning is widely recognized as a core capability of autonomous LLM-based agents; however, current evaluation frameworks suffer from being largely episodic, domain-specific, or insufficiently grounded in persistent economic…

Large Language Models (LLMs) have significantly advanced tool-augmented agents, enabling autonomous reasoning via API interactions. However, executing multi-step tasks within massive tool libraries remains challenging due to two critical…

Artificial Intelligence · Computer Science 2026-04-15 Rongzhe Wei , Ge Shi , Min Cheng , Na Zhang , Pan Li , Sarthak Ghosh , Vaibhav Gorde , Leman Akoglu

Geospatial code generation is becoming a key frontier in integrating artificial intelligence with geo-scientific analysis, yet standardised automated evaluation tools for this task remain absent. This study presents AutoGEEval++, an…

Large language models (LLMs) have grown in popularity due to their natural language interface and pre trained knowledge, leading to rapidly increasing success in question-answering (QA) tasks. More recently, multi-agent systems with…

Machine Learning · Computer Science 2024-10-21 Bhrij Patel , Vishnu Sashank Dorbala , Amrit Singh Bedi , Dinesh Manocha

The rapid progress of large language models (LLMs) has seen them excel and frequently surpass human performance on standard benchmarks. This has enabled many downstream applications, such as LLM agents, to rely on their reasoning to address…

Computation and Language · Computer Science 2025-02-17 Harsh Kohli , Sachin Kumar , Huan Sun

Large Language Models (LLMs) have demonstrated remarkable capabilities across a wide range of general-domain tasks. However, their effectiveness in specialized fields, such as construction, remains underexplored. In this paper, we introduce…

Computation and Language · Computer Science 2025-08-25 Yanzhao Wu , Lufan Wang , Rui Liu

We present M$^3$-VQA, a novel knowledge-based Visual Question Answering (VQA) benchmark, to enhance the evaluation of multimodal large language models (MLLMs) in fine-grained multimodal entity understanding and complex multi-hop reasoning.…

Computer Vision and Pattern Recognition · Computer Science 2026-04-29 Jiatong Ma , Longteng Guo , Yuchen Liu , Zijia Zhao , Dongze Hao , Xuanxu Lin , Jing Liu

Large Language Models (LLMs) have exhibited impressive generation capabilities, but they suffer from hallucinations when solely relying on their internal knowledge, especially when answering questions that require less commonly known…

Computation and Language · Computer Science 2023-11-01 Wenting Zhao , Ye Liu , Tong Niu , Yao Wan , Philip S. Yu , Shafiq Joty , Yingbo Zhou , Semih Yavuz

Understanding and reasoning about spatial relationships is a fundamental capability for Visual Question Answering (VQA) and robotics. While Vision Language Models (VLM) have demonstrated remarkable performance in certain VQA benchmarks,…

Computer Vision and Pattern Recognition · Computer Science 2024-01-23 Boyuan Chen , Zhuo Xu , Sean Kirmani , Brian Ichter , Danny Driess , Pete Florence , Dorsa Sadigh , Leonidas Guibas , Fei Xia

The emergence of Large Language Models (LLMs) has transformed information access, with current LLMs also powering deep research systems that can generate comprehensive report-style answers, through planned iterative search, retrieval, and…

Computation and Language · Computer Science 2025-06-18 Bruno Martins , Piotr Szymański , Piotr Gramacki

Given the remarkable performance of Large Language Models (LLMs), an important question arises: Can LLMs conduct human-like scientific research and discover new knowledge, and act as an AI scientist? Scientific discovery is an iterative…

Machine Learning · Computer Science 2025-02-24 Tingting Chen , Srinivas Anumasa , Beibei Lin , Vedant Shah , Anirudh Goyal , Dianbo Liu

Recent advancements in reinforcement learning (RL) have enhanced the reasoning abilities of large language models (LLMs), yet the impact on multimodal LLMs (MLLMs) is limited. Particularly in vision-intensive tasks like geometric reasoning,…

Computation and Language · Computer Science 2025-09-23 Guizhen Chen , Weiwen Xu , Hao Zhang , Hou Pong Chan , Deli Zhao , Anh Tuan Luu , Yu Rong
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