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The clinical time-series setting poses a unique combination of challenges to data modeling and sharing. Due to the high dimensionality of clinical time series, adequate de-identification to preserve privacy while retaining data utility is…

The current global health emergency triggered by the pandemic COVID-19 is one of the greatest challenges mankind face in this generation. Computational simulations have played an important role to predict the development of the current…

Populations and Evolution · Quantitative Biology 2020-06-11 Kok Yew Ng , Meei Mei Gui

This research addresses the challenge of conducting interpretable causal inference between a binary treatment and its resulting outcome when not all confounders are known. Confounders are factors that have an influence on both the treatment…

Machine Learning · Computer Science 2023-10-24 Sohaib Kiani , Jared Barton , Jon Sushinsky , Lynda Heimbach , Bo Luo

Vast quantities of person-generated health data (wearables) are collected but the process of annotating to feed to machine learning models is impractical. This paper discusses ways in which self-supervised approaches that use contrastive…

Machine Learning · Computer Science 2021-11-16 Kevalee Shah , Dimitris Spathis , Chi Ian Tang , Cecilia Mascolo

Treatment strategies are critical in healthcare, particularly when outcomes are subject to censoring. This study introduces the Counterfactual Buckley-James Q-Learning framework, which integrates the Buckley-James method with reinforcement…

Methodology · Statistics 2025-08-18 Jeongjin Lee , Jong-Min Kim

People can acquire knowledge in an unsupervised manner by reading, and compose the knowledge to make novel combinations. In this paper, we investigate whether pretrained language models can perform compositional generalization in a…

Computation and Language · Computer Science 2022-10-21 Xiao Liu , Yansong Feng , Jizhi Tang , Chengang Hu , Dongyan Zhao

Answering counterfactual queries has important applications such as explainability, robustness, and fairness but is challenging when the causal variables are unobserved and the observations are non-linear mixtures of these latent variables,…

Machine Learning · Computer Science 2024-04-16 Zeyu Zhou , Ruqi Bai , Sean Kulinski , Murat Kocaoglu , David I. Inouye

Observational studies are rising in importance due to the widespread accumulation of data in fields such as healthcare, education, employment and ecology. We consider the task of answering counterfactual questions such as, "Would this…

Machine Learning · Statistics 2018-06-07 Fredrik D. Johansson , Uri Shalit , David Sontag

Counterfactual explanations are one of the prominent eXplainable Artificial Intelligence (XAI) techniques, and suggest changes to input data that could alter predictions, leading to more favourable outcomes. Existing counterfactual methods…

Artificial Intelligence · Computer Science 2025-05-22 Andrei Buliga , Chiara Di Francescomarino , Chiara Ghidini , Marco Montali , Massimiliano Ronzani

Clinical trials constitute a critical yet exceptionally challenging and costly stage of drug development (\$2.6B per drug), where protocols are encoded as complex natural language documents, motivating the use of AI systems beyond manual…

Artificial Intelligence · Computer Science 2026-04-06 Sixue Xing , Kerui Wu , Xuanye Xia , Meng Jiang , Jintai Chen , Tianfan Fu

The rapid growth in data availability has facilitated research and development, yet not all industries have benefited equally due to legal and privacy constraints. The healthcare sector faces significant challenges in utilizing patient data…

Methodology · Statistics 2025-11-18 Katariina Perkonoja , Kari Auranen , Joni Virta

Counterfactual explanations (CFEs) provide human-centric interpretability by identifying the minimal, actionable changes required to alter a machine learning model's prediction. Therefore, CFs can be used as (i) interventions for…

Machine Learning · Computer Science 2026-04-21 Shovito Barua Soumma , Asiful Arefeen , Stephanie M. Carpenter , Melanie Hingle , Hassan Ghasemzadeh

Counterfactual explanations elucidate algorithmic decisions by pointing to scenarios that would have led to an alternative, desired outcome. Giving insight into the model's behavior, they hint users towards possible actions and give grounds…

Machine Learning · Statistics 2024-04-05 Susanne Dandl , Kristin Blesch , Timo Freiesleben , Gunnar König , Jan Kapar , Bernd Bischl , Marvin Wright

In this work, we modify and apply self-supervision techniques to the domain of medical health insurance claims. We model patients' healthcare claims history analogous to free-text narratives, and introduce pre-trained `prior knowledge',…

Computation and Language · Computer Science 2021-08-02 Emilia Apostolova , Fazle Karim , Guido Muscioni , Anubhav Rana , Jeffrey Clyman

Electronic health records contain valuable information for monitoring patients' health trajectories over time. Disease progression models have been developed to understand the underlying patterns and dynamics of diseases using these data as…

Long-horizon clinical simulation -- predicting how a patient's physiology evolves over years under specified interventions -- is central to chronic-disease care, yet existing electronic health record (EHR) models are predominantly…

Machine Learning · Computer Science 2026-05-22 Jiangyuan Wang , Xuyong Chen , Junwei He , Xu Xu , Shasha Xie , Fuman Han

Applied researchers in biomedicine and related fields are often interested in estimating the causal effect of a treatment or intervention. Although randomized clinical trials are considered the gold standard for establishing causal effects,…

Autoregressive video generation aims at real-time, open-ended synthesis. Yet, cinematic storytelling is not merely the endless extension of a single scene; it requires progressing through evolving events, viewpoint shifts, and discrete shot…

Computer Vision and Pattern Recognition · Computer Science 2026-05-13 Yihao Meng , Zichen Liu , Hao Ouyang , Qiuyu Wang , Ka Leong Cheng , Yue Yu , Hanlin Wang , Haobo Li , Jiapeng Zhu , Yanhong Zeng , Xing Zhu , Yujun Shen , Qifeng Chen , Huamin Qu

Timely and personalized treatment decisions are essential across a wide range of healthcare settings where patient responses can vary significantly and evolve over time. Clinical data used to support these treatment decisions are often…

Machine Learning · Computer Science 2025-12-03 Qianyi Xu , Gousia Habib , Feng Wu , Dilruk Perera , Mengling Feng

Single-arm trials accelerate study timelines by reducing the number of patients that must be recruited for a concurrent control group. However, these designs require an alternative comparator to estimate treatment effects. One approach is…