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Leveraging Graph Neural Networks (GNNs) as graph encoders and aligning the resulting representations with Large Language Models (LLMs) through alignment instruction tuning has become a mainstream paradigm for constructing Graph Language…

Machine Learning · Computer Science 2026-05-13 Haibo Chen , Xin Wang , Jiaheng Chao , Ling Feng , Wenwu Zhu

The lifecycle of large language models (LLMs) is far more complex than that of traditional machine learning models, involving multiple training stages, diverse data sources, and varied inference methods. While prior research on data…

Cryptography and Security · Computer Science 2025-02-21 Pengfei He , Yue Xing , Han Xu , Zhen Xiang , Jiliang Tang

Large language models (LLMs) are vulnerable when trained on datasets containing harmful content, which leads to potential jailbreaking attacks in two scenarios: the integration of harmful texts within crowdsourced data used for pre-training…

Cryptography and Security · Computer Science 2024-06-03 Xiaoqun Liu , Jiacheng Liang , Muchao Ye , Zhaohan Xi

Graph representation learning, involving both node features and graph structures, is crucial for real-world applications but often encounters pervasive noise. State-of-the-art methods typically address noise by focusing separately on node…

Machine Learning · Computer Science 2024-10-17 Guangxin Su , Yifan Zhu , Wenjie Zhang , Hanchen Wang , Ying Zhang

Large Language Models (LLMs) have greatly advanced Natural Language Processing (NLP), particularly through instruction tuning, which enables broad task generalization without additional fine-tuning. However, their reliance on large-scale…

Computation and Language · Computer Science 2026-04-21 San Kim , Gary Geunbae Lee

Large Language Models (LLMs) have shown remarkable capabilities in processing various data structures, including graphs. While previous research has focused on developing textual encoding methods for graph representation, the emergence of…

Machine Learning · Computer Science 2024-09-16 Zhiqiang Zhong , Davide Mottin

Locally differentially private (LDP) graph analysis allows private analysis on a graph that is distributed across multiple users. However, such computations are vulnerable to data poisoning attacks where an adversary can skew the results by…

Cryptography and Security · Computer Science 2025-09-11 Jacob Imola , Amrita Roy Chowdhury , Kamalika Chaudhuri

The latest advancements in large language models (LLMs) have revolutionized the field of natural language processing (NLP). Inspired by the success of LLMs in NLP tasks, some recent work has begun investigating the potential of applying…

Artificial Intelligence · Computer Science 2025-02-25 Shengyin Sun , Yuxiang Ren , Jiehao Chen , Chen Ma

Graph Neural Networks (GNNs) have demonstrated remarkable performance across a spectrum of graph-related tasks, however concerns persist regarding their vulnerability to adversarial perturbations. While prevailing defense strategies focus…

Machine Learning · Computer Science 2025-10-28 Sofiane Ennadir , Johannes F. Lutzeyer , Michalis Vazirgiannis , El Houcine Bergou

Large language models (LLMs) have demonstrated remarkable capabilities across various domains, yet their application to relational deep learning (RDL) remains underexplored. Existing approaches adapt LLMs by traversing relational links…

Computation and Language · Computer Science 2025-06-09 Fang Wu , Vijay Prakash Dwivedi , Jure Leskovec

In precision medicine, quantitative multi-omic features, topological context, and textual biological knowledge play vital roles in identifying disease-critical signaling pathways and targets. Existing pipelines capture only part of…

Artificial Intelligence · Computer Science 2025-12-17 Heming Zhang , Di Huang , Wenyu Li , Michael Province , Yixin Chen , Philip Payne , Fuhai Li

Generalizing to unseen graph tasks without task-pecific supervision remains challenging. Graph Neural Networks (GNNs) are limited by fixed label spaces, while Large Language Models (LLMs) lack structural inductive biases. Recent advances in…

Machine Learning · Computer Science 2025-08-29 Yicong Wu , Guangyue Lu , Yuan Zuo , Huarong Zhang , Junjie Wu

The integration of Large Language Models (LLMs) with Graph Neural Networks (GNNs) has recently been explored to enhance the capabilities of Text Attribute Graphs (TAGs). Most existing methods feed textual descriptions of the graph structure…

Computation and Language · Computer Science 2025-04-03 Zhaoxing Li , Xiaoming Zhang , Haifeng Zhang , Chengxiang Liu

Graph Neural Networks (GNNs) have emerged as a prominent graph learning model in various graph-based tasks over the years. Nevertheless, due to the vulnerabilities of GNNs, it has been empirically shown that malicious attackers could easily…

Machine Learning · Computer Science 2025-12-23 Yushun Dong , Binchi Zhang , Hanghang Tong , Jundong Li

Online incivility has emerged as a widespread and persistent problem in digital communities, imposing substantial social and psychological burdens on users. Although many platforms attempt to curb incivility through moderation and automated…

Computation and Language · Computer Science 2026-02-03 Zihan Chen , Lanyu Yu

Virtual screening plays a critical role in modern drug discovery by enabling the identification of promising candidate molecules for experimental validation. Traditional machine learning methods such, as Support Vector Machines (SVM) and…

Machine Learning · Computer Science 2025-04-29 Radia Berreziga , Mohammed Brahimi , Khairedine Kraim , Hamid Azzoune

Previous learning-based vulnerability detection methods relied on either medium-sized pre-trained models or smaller neural networks from scratch. Recent advancements in Large Pre-Trained Language Models (LLMs) have showcased remarkable…

Software Engineering · Computer Science 2024-01-30 Xin Zhou , Ting Zhang , David Lo

Graph Neural Networks (GNNs) have made rapid developments in the recent years. Due to their great ability in modeling graph-structured data, GNNs are vastly used in various applications, including high-stakes scenarios such as financial…

Machine Learning · Computer Science 2024-11-26 Enyan Dai , Tianxiang Zhao , Huaisheng Zhu , Junjie Xu , Zhimeng Guo , Hui Liu , Jiliang Tang , Suhang Wang

Graph Structure Learning (GSL) focuses on capturing intrinsic dependencies and interactions among nodes in graph-structured data by generating novel graph structures. Graph Neural Networks (GNNs) have emerged as promising GSL solutions,…

Machine Learning · Computer Science 2025-03-11 Zirui Guo , Lianghao Xia , Yanhua Yu , Yuling Wang , Kangkang Lu , Zhiyong Huang , Chao Huang

Deep neural networks (DNNs) have been widely applied to various applications, including image classification, text generation, audio recognition, and graph data analysis. However, recent studies have shown that DNNs are vulnerable to…

Cryptography and Security · Computer Science 2022-10-07 Lichao Sun , Yingtong Dou , Carl Yang , Ji Wang , Yixin Liu , Philip S. Yu , Lifang He , Bo Li