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Scientific software is essential to scientific innovation and in many ways it is distinct from other types of software. Abandoned (or unmaintained), buggy, and hard to use software, a perception often associated with scientific software can…

Software Engineering · Computer Science 2025-06-23 Addi Malviya Thakur , Reed Milewicz , Mahmoud Jahanshahi , Lavínia Paganini , Bogdan Vasilescu , Audris Mockus

The field of big code relies on mining large corpora of code to perform some learning task. A significant threat to this approach has been recently identified by Lopes et al. (2017) who found a large amount of near-duplicate code on GitHub.…

Software Engineering · Computer Science 2019-08-13 Miltiadis Allamanis

Reading code is an essential activity in software maintenance and evolution. Several studies with human subjects have investigated how different factors, such as the employed programming constructs and naming conventions, can impact code…

Software Engineering · Computer Science 2021-10-05 Delano Oliveira , Reydne Bruno , Fernanda Madeiral , Fernando Castor

The drive for reproducibility in the computational sciences has provoked discussion and effort across a broad range of perspectives: technological, legislative/policy, education, and publishing. Discussion on these topics is not new, but…

Quantitative Methods · Quantitative Biology 2018-10-10 Daniel G. Hurley , Joseph Cursons , Matthew Faria , David M. Budden , Vijay Rajagopal , Edmund J. Crampin

With the goal of uncovering the challenges faced by European AI students during their research endeavors, we surveyed 28 AI doctoral candidates from 13 European countries. The outcomes underscore challenges in three key areas: (1) the…

Computers and Society · Computer Science 2024-08-14 Andrea Hrckova , Jennifer Renoux , Rafael Tolosana Calasanz , Daniela Chuda , Martin Tamajka , Jakub Simko

Computational notebook software such as Jupyter Notebook is popular for data science tasks. Numerous computational notebooks are available on the Web and reusable; however, searching for computational notebooks manually is a tedious task,…

Information Retrieval · Computer Science 2022-02-01 Misato Horiuchi , Yuya Sasaki , Chuan Xiao , Makoto Onizuka

Computational notebooks have become the preferred tool of choice for data scientists and practitioners to perform analyses and share results. Notebooks uniquely combine scripts with documentation. With the emergence of generative AI (GenAI)…

Software Engineering · Computer Science 2025-11-03 Tasha Settewong , Youmei Fan , Raula Gaikovina Kula , Kenichi Matsumoto

Code readability and software complexity are important software quality metrics that impact other software metrics such as maintainability, reusability, portability and reliability. This paper presents an empirical study of the…

Software Engineering · Computer Science 2019-09-05 Duaa Alawad , Manisha Panta , Minhaz Zibran , Md Rakibul Islam

Code quality remains an abstract concept that fails to get traction at the business level. Consequently, software companies keep trading code quality for time-to-market and new features. The resulting technical debt is estimated to waste up…

Software Engineering · Computer Science 2022-03-10 Adam Tornhill , Markus Borg

Reproducibility is a fundamental requirement of the scientific process since it enables outcomes to be replicated and verified. Computational scientific experiments can benefit from improved reproducibility for many reasons, including…

Databases · Computer Science 2019-09-04 Maria Luiza Mondelli , A. Townsend Peterson , Luiz M. R. Gadelha

Plagiarism is a pressing concern, even more so with the availability of large language models. Existing plagiarism detection systems reliably find copied and moderately reworded text but fail for idea plagiarism, especially in mathematical…

Information Retrieval · Computer Science 2024-06-03 Ankit Satpute , Andre Greiner-Petter , Noah Gießing , Isabel Beckenbach , Moritz Schubotz , Olaf Teschke , Akiko Aizawa , Bela Gipp

Building Performance Simulation (BPS) uses advanced computational and data science methods. Reproducibility, the ability to obtain the same results by using the same data and methods, is essential in BPS research to ensure the reliability…

Digital Libraries · Computer Science 2025-03-19 Christian Ghiaus

The reproducibility of software environments is a critical concern in modern software engineering, with ramifications ranging from the effectiveness of collaboration workflows to software supply chain security and scientific…

Software Engineering · Computer Science 2026-01-21 Julien Malka , Stefano Zacchiroli , Théo Zimmermann

Ascertaining the feasibility of independent falsification or repetition of published results is vital to the scientific process, and replication or reproduction experiments are routinely performed in many disciplines. Unfortunately, such…

Databases · Computer Science 2020-09-11 Dimitri Braininger , Wolfgang Mauerer , Stefanie Scherzinger

Reproducibility, the ability to recompute results, and replicability, the chances other experimenters will achieve a consistent result, are two foundational characteristics of successful scientific research. Consistent findings from…

Applications · Statistics 2015-06-23 Jeffrey T. Leek , Roger D. Peng

It is important for researchers to understand precisely how data scientists turn raw data into insights, including typical programming patterns, workflow, and methodology. This paper contributes a novel system, called DataInquirer, that…

Human-Computer Interaction · Computer Science 2024-05-29 Jinjin Zhao , Avidgor Gal , Sanjay Krishnan

Citing data and software is a means to give scholarly credit and to facilitate access to research objects. Citation principles encourage authors to provide full descriptions of objects, with stable links, in their papers. As Jupyter…

Digital Libraries · Computer Science 2020-04-28 Morgan F. Wofford , Bernadette M. Boscoe , Christine L. Borgman , Irene V. Pasquetto , Milena S. Golshan

There is a gap between how people explore data and how Jupyter-like computational notebooks are designed. People explore data nonlinearly, using execution undos, branching, and/or complete reverts, whereas notebooks are designed for…

Human-Computer Interaction · Computer Science 2025-04-03 Hanxi Fang , Supawit Chockchowwat , Hari Sundaram , Yongjoo Park

The reproduction and replication of reported scientific results is a hot topic within the academic community. The retraction of numerous studies from a wide range of disciplines, from climate science to bioscience, has drawn the focus of…

Computational Engineering, Finance, and Science · Computer Science 2014-10-15 Tom Crick , Benjamin A. Hall , Samin Ishtiaq , Kenji Takeda

Scientific research frequently involves the use of computational tools and methods. Providing thorough documentation, open-source code, and data -- the creation of reproducible computational research -- helps others understand a…

Digital Libraries · Computer Science 2022-09-14 Tim von Hahn , Chris K. Mechefske
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