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Open-sourcing research publications is a key enabler for the reproducibility of studies and the collective scientific progress of a research community. As all fields of science develop more advanced algorithms, we become more dependent on…

Systems and Control · Electrical Eng. & Systems 2023-08-22 Siqi Zhou , Lukas Brunke , Allen Tao , Adam W. Hall , Federico Pizarro Bejarano , Jacopo Panerati , Angela P. Schoellig

The application of code clone technology accelerates code search, improves code reuse efficiency, and assists in software quality assessment and code vulnerability detection. However, the application of code clones also introduces software…

Software Engineering · Computer Science 2022-02-18 Xunhui Zhang , Tao Wang , Yue Yu , Yanzhi Zhang , Yan Zhong , Huaimin Wang

Although reproducibility is a core tenet of the scientific method, it remains challenging to reproduce many results. Surprisingly, this also holds true for computational results in domains such as systems biology where there have been…

Quantitative Methods · Quantitative Biology 2021-04-13 Michael L. Blinov , John H. Gennari , Jonathan R. Karr , Ion I. Moraru , David P. Nickerson , Herbert M. Sauro

Large scale analysis of source code, and in particular scientific source code, holds the promise of better understanding the data science process, identifying analytical best practices, and providing insights to the builders of scientific…

Machine Learning · Computer Science 2020-09-01 Ge Zhang , Mike A. Merrill , Yang Liu , Jeffrey Heer , Tim Althoff

Despite its crucial role in research experiments, code correctness is often presumed only on the basis of the perceived quality of results. This assumption comes with the risk of erroneous outcomes and potentially misleading findings. To…

Computation and Language · Computer Science 2024-07-08 Sara Papi , Marco Gaido , Andrea Pilzer , Matteo Negri

With the advent of open source software, a veritable treasure trove of previously proprietary software development data was made available. This opened the field of empirical software engineering research to anyone in academia. Data that is…

Software Engineering · Computer Science 2022-04-19 Adam Tutko , Austin Z. Henley , Audris Mockus

Replication of scientific experiments is critical to the advance of science. Unfortunately, the discipline of Computer Science has never treated replication seriously, even though computers are very good at doing the same thing over and…

General Literature · Computer Science 2013-04-15 Ian P. Gent

The readability of source code is key for understanding and maintaining software systems and tests. Several studies investigate the readability of source code, but there is limited research on the readability of test code and related…

Software Engineering · Computer Science 2024-03-26 Dietmar Winkler , Pirmin Urbanke , Rudolf Ramler

This paper presents a tertiary review of software quality measurement research. To conduct this review, we examined an initial dataset of 7,811 articles and found 75 relevant and high-quality secondary analyses of software quality research.…

Software Engineering · Computer Science 2021-07-30 Kaylea Champion , Sejal Khatri , Benjamin Mako Hill

Reproducibility should be a cornerstone of scientific research and is a growing concern among the scientific community and the public. Understanding how to design services and tools that support documentation, preservation and sharing is…

Human-Computer Interaction · Computer Science 2019-03-15 Sebastian S. Feger , Sünje Dallmeier-Tiessen , Albrecht Schmidt , Paweł W. Woźniak

A common concern in experimental research is the auditability and reproducibility of experiments. Experiments are usually designed, provisioned, managed, and analyzed by diverse teams of specialists (e.g., researchers, technicians and…

Code cloning is not only assumed to inflate maintenance costs but also considered defect-prone as inconsistent changes to code duplicates can lead to unexpected behavior. Consequently, the identification of duplicated code, clone detection,…

Software Engineering · Computer Science 2017-11-15 Elmar Juergens , Florian Deissenboeck , Benjamin Hummel , Stefan Wagner

Scientific workflow has become essential in software engineering because it provides a structured approach to designing, executing, and analyzing scientific experiments. Software developers and researchers have developed hundreds of…

Software Engineering · Computer Science 2023-09-15 Khairul Alam , Banani Roy , Alexander Serebrenik

Software code quality is a construct with three dimensions: maintainability, reliability, and functionality. Although many firms have incorporated code quality metrics in their operations, evaluating these metrics still lacks consistent…

Software Engineering · Computer Science 2024-01-17 Siyuan Jin , Mianmian Zhang , Yekai Guo , Yuejiang He , Ziyuan Li , Bichao Chen , Bing Zhu , Yong Xia

Software systems are getting more complex as the system grows where maintaining such system is a primary concern for the industry. Code clone is one of the factors making software maintenance more difficult. It is a process of replicating…

Software Engineering · Computer Science 2012-05-28 Md. Monzur Morshed , Md. Arifur Rahman , Salah Uddin Ahmed

Scientific software is one of the key elements for reproducible research. However, classic publications and related scientific software are typically not (sufficiently) linked, and it lacks tools to jointly explore these artefacts. In this…

Digital Libraries · Computer Science 2018-06-21 Anett Hoppe , Jascha Hagen , Helge Holzmann , Günter Kniesel , Ralph Ewerth

Concerns about reproducibility in artificial intelligence (AI) have emerged, as researchers have reported unsuccessful attempts to directly reproduce published findings in the field. Replicability, the ability to affirm a finding using the…

Computer Vision and Pattern Recognition · Computer Science 2023-04-21 Kehinde Ajayi , Muntabir Hasan Choudhury , Sarah Rajtmajer , Jian Wu

Reproducibility of computationally-derived scientific discoveries should be a certainty. As the product of several person-years' worth of effort, results -- whether disseminated through academic journals, conferences or exploited through…

Computational Engineering, Finance, and Science · Computer Science 2015-06-17 Tom Crick , Benjamin A. Hall , Samin Ishtiaq

Scientific workflows facilitate computational, data manipulation, and sometimes visualization steps for scientific data analysis. They are vital for reproducing and validating experiments, usually involving computational steps in scientific…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-11-22 Jinli Duan , Shasha Dennis

Scientific computation is a discipline that combines numerical analysis, physical understanding, algorithm development, and structured programming. Several yottacycles per year on the world's largest computers are spent simulating problems…

Programming Languages · Computer Science 2018-01-10 Matthew G. Knepley