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We suggest a theoretical description of the force-induced translocation dynamics of a polymer chain through a nanopore. Our consideration is based on the tensile (Pincus) blob picture of a pulled chain and the notion of propagating front of…

Soft Condensed Matter · Physics 2012-04-17 J. L. A. Dubbeldam , V. G. Rostiashvili , A. Milchev , T. A. Vilgis

We consider reaction-diffusion equations with combustion-type non-linearities in two dimensions and study speed-up of their pulsating fronts by general periodic incompressible flows with a cellular structure. We show that the occurence of…

Analysis of PDEs · Mathematics 2009-11-13 Andrej Zlatos

We determine the asymptotic spreading speed of the solutions of a Fisher-KPP reaction-diffusion equation, starting from compactly supported initial data, when the diffusion coefficient is a fixed bounded monotone profile that is shifted at…

Analysis of PDEs · Mathematics 2021-03-30 Grégory Faye , Thomas Giletti , Matt Holzer

Metal-organic frameworks (MOFs) are promising materials for gas sensing but are often limited to single-use detection. We demonstrate a hybridization strategy synergistically deploying conductive MOFs (cMOFs) and conductive polymers (cPs)…

Experimental results of towing a cylinder through a dense suspension of cornstarch and sucrose-water are presented. Focus is placed on the jamming fronts that exist in such systems. The literature has concentrated on the propagation of the…

Soft Condensed Matter · Physics 2021-06-14 Olav Rømcke , Ivo R. Peters , R. Jason Hearst

The control of solute fluxes through either microscopic phoresis or hydrodynamic advection is a fundamental way to transport molecules, which are ubiquitously present in nature and technology. We study the transport of large solute such as…

Soft Condensed Matter · Physics 2021-09-29 Tatsuya Fukuyama , Sho Nakama , Yusuke T. Maeda

Couplings between biochemical and mechanical processes have a profound impact on embryonic development. However, in-vitro studies capable of quantifying these interactions have remained elusive. Here, we investigate a synthetic system where…

Soft Condensed Matter · Physics 2024-12-09 Nicolas Lobato-Dauzier , Ananyo Maitra , André Estevez-Torres , Jean-Christophe Galas

The impact of thermal fluctuations on the translocation dynamics of a polymer chain driven through a narrow pore has been investigated theoretically and by means of extensive Molecular-Dynamics (MD) simulation. The theoretical consideration…

Soft Condensed Matter · Physics 2015-06-12 J. L. A. Dubbeldam , V. G. Rostiashvili , A. Milchev , T. A. Vilgis

We introduce a speed selection mechanism for front propagation in reaction-diffusion systems with multiple fields. This mechanism applies to pulled and pushed fronts alike, and operates by restricting the fields to large "finite" intervals…

Pattern Formation and Solitons · Physics 2009-11-07 Stavros Theodorakis , Epameinondas Leontidis

Recently it has been shown that when an equation that allows so-called pulled fronts in the mean-field limit is modelled with a stochastic model with a finite number $N$ of particles per correlation volume, the convergence to the speed…

Statistical Mechanics · Physics 2009-11-07 Debabrata Panja

We investigate the propagation of chemical fronts arising in Fisher--Kolmogorov--Petrovskii--Piskunov (FKPP) type models in the presence of a steady cellular flow. In the long-time limit, a steadily propagating pulsating front is…

Fluid Dynamics · Physics 2015-07-01 Alexandra Tzella , Jacques Vanneste

Iso-flux tension propagation (IFTP) theory and Langevin dynamics (LD) simulations are employed to study the dynamics of channel-driven polymer translocation in which a polymer translocates into a narrow channel and the monomers in the…

Soft Condensed Matter · Physics 2022-05-16 Jalal Sarabadani , Ralf Metzler , Tapio Ala-Nissila

The sensitivity to perturbations of the Fisher and Kolmogorov, Petrovskii, Piskunov front is used to find a quantity revealing perturbations of diffusion in a concentrated solution of two chemical species with different diffusivities. The…

Pattern Formation and Solitons · Physics 2019-02-20 Gabriel Morgado , Bogdan Nowakowski , Annie Lemarchand

We study the translocation of a semiflexible polymer through a conical channel with attractive surface interactions and a driving force which varies spatially inside the channel. Using the results of the translocation dynamics of a flexible…

Soft Condensed Matter · Physics 2022-11-15 Andri Sharma , Rajeev Kapri , Abhishek Chaudhuri

The translocation of a polymer through a pore in a membrane separating fluids of different viscosities is studied via several computational approaches. Starting with the polymer halfway, we find that as a viscosity difference across the…

Soft Condensed Matter · Physics 2013-04-17 Hendrick W. de Haan , Gary W. Slater

We report experiments investigating jamming fronts in a floating layer of cornstarch suspension. The suspension has a packing fraction close to jamming, which dynamically turns into a solid when impacted at a high speed. We show that the…

Soft Condensed Matter · Physics 2014-12-04 Ivo R. Peters , Heinrich M. Jaeger

We discuss a new mode of ionization front passage in semiconductor structures. The front of avalanche ionization propagates into an intrinsic semiconductor with a constant electric field $E_{\rm m}$ in presence of a small concentration of…

Materials Science · Physics 2009-11-13 Pavel Rodin , Andey Minarsky , Igor Grekhov

We investigate the influence of steady periodic flows on the propagation of chemical fronts in an infinite channel domain. We focus on the sharp front arising in Fisher--Kolmogorov--Petrovskii--Piskunov (FKPP) type models in the limit of…

Fluid Dynamics · Physics 2018-12-12 Alexandra Tzella , Jacques Vanneste

Recent observations of reflected propagating and standing slow-mode waves in hot flaring coronal loops have spurred our investigation into their underlying excitation and damping mechanisms. To understand these processes, we conduct 2.5D…

Solar and Stellar Astrophysics · Physics 2024-04-01 Tongjiang Wang , Leon Ofman , Stephen J. Bradshaw

We review recent progress on the theory of dynamics of polymer translocation through a nanopore based on the iso-flux tension propagation (IFTP) theory. We investigate both pore-driven translocation of flexible and a semi-flexible polymers,…

Soft Condensed Matter · Physics 2018-10-16 Jalal Sarabadani , Tapio Ala-Nissila