Related papers: Tangle structure trees II: trees of tangles and ta…

Deciding whether there is a single tree -a supertree- that summarizes the evolutionary information in a collection of unrooted trees is a fundamental problem in phylogenetics. We consider two versions of this question: agreement and…

The classical Matrix-Tree Theorem allows one to list the spanning trees of a graph by monomials in the expansion of the determinant of a certain matrix. We prove that in the case of three-graphs (that is, hypergraphs whose edges have…

Staged trees are probabilistic graphical models capable of representing any class of non-symmetric independence via a coloring of its vertices. Several structural learning routines have been defined and implemented to learn staged trees…

A \emph{binary tanglegram} is a drawing of a pair of rooted binary trees whose leaf sets are in one-to-one correspondence; matching leaves are connected by inter-tree edges. For applications, for example, in phylogenetics, it is essential…

In this paper, we discuss the entanglement properties of graph-diagonal states, with particular emphasis on calculating the threshold for the transition between the presence and absence of entanglement (i.e. the separability point). Special…

We present an extension of the duality theorem, previously defined by S. Catani et al. on the one-loop level, to higher loop orders. The duality theorem provides a relation between loop integrals and tree-level phase-space integrals. Here,…

A vertex of degree one in a tree is called an end vertex and a vertex of degree at least three is called a branch vertex. For a graph $G$, let $\sigma_2$ be the minimum degree sum of two nonadjacent vertices in $G$. We consider tree…

A tangle is a connected topological space constructed by gluing several copies of the unit interval $[0, 1]$. We explore which tangles guarantee envy-free allocations of connected shares for n agents, meaning that such allocations exist no…

We give a short, topological proof that all graphs admit tree-decompositions displaying their topological ends.

Strengthening the classical concept of Steiner trees, West and Wu [J. Combin. Theory Ser. B 102 (2012), 186--205] introduced the notion of a $T$-connector in a graph $G$ with a set $T$ of terminals. They conjectured that if the set $T$ is…

The status of a vertex $x$ in a graph is the sum of the distances between $x$ and all other vertices. Let $G$ be a connected graph. The status sequence of $G$ is the list of the statuses of all vertices arranged in nondecreasing order. $G$…

In security analysis, attack trees are a major tool for showing the structural decomposition of attacks and for supporting the evaluation of the quantitative properties (called attributes) of the attacks. However, the validities of…

The transmission of a vertex in a connected graph is the sum of its distances to all the other vertices. A graph is transmission irregular (TI) when all of its vertices have mutually distinct transmissions. In an earlier paper, Al-Yakoob…

Graph decompositions are the natural generalisation of tree decompositions where the decomposition tree is replaced by a genuine graph. Recently they found theoretical applications in the theory of sparsity, topological graph theory,…

Let $G$ be a 3-connected planar graph. Define the co-tree of a spanning tree $T$ of $G$ as the graph induced by the dual edges of $E(G)-E(T)$. The well-known cut-cycle duality implies that the co-tree is itself a tree. Let a $k$-tree be a…

We show that an arbitrary infinite graph $G$ can be compactified by its ends plus its critical vertex sets, where a finite set $X$ of vertices of an infinite graph is critical if its deletion leaves some infinitely many components each with…

Phylogenetic networks are a type of directed acyclic graph that represent how a set $X$ of present-day species are descended from a common ancestor by processes of speciation and reticulate evolution. In the absence of reticulate evolution,…

This paper presents the novel `uniqueness tree' algorithm, as one possible method for determining whether two finite, undirected graphs are isomorphic. We prove that the algorithm has polynomial time complexity in the worst case, and that…

Decompositions of networks are useful not only for structural exploration. They also have implications and use in analysis and computational solution of processes (such as the Ising model, percolation, SIR model) running on a given network.…

We study edge-decompositions of highly connected graphs into copies of a given tree. In particular we attack the following conjecture by Bar\'at and Thomassen: for each tree $T$, there exists a natural number $k_T$ such that if $G$ is a…