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As complex networks find applications in a growing range of disciplines, the diversity of naturally occurring and model networks being studied is exploding. The adoption of a well-developed collection of network taxonomies is a natural…

Combinatorics · Mathematics 2016-01-25 Ann Sizemore , Chad Giusti , Danielle Bassett

We consider the class F of 2-connected non-planar K_{3,3}-subdivision-free graphs that are embeddable in the projective plane. We show that these graphs admit a unique decomposition as a graph K_5 (the core) where the edges are replaced by…

Combinatorics · Mathematics 2010-12-23 Andrei Gagarin , Gilbert Labelle , Pierre Leroux

It is proven that a connected graph is planar if and only if all its cocycles with at least four edges are "grounded" in the graph. The notion of grounding of this planarity criterion, which is purely combinatorial, stems from the intuitive…

Combinatorics · Mathematics 2014-10-22 K. Dosen , Z. Petric

Networks offer a powerful approach to modeling complex systems by representing the underlying set of pairwise interactions. Link prediction is the task that predicts links of a network that are not directly visible, with profound…

Physics and Society · Physics 2024-04-22 Yijun Ran , Xiao-Ke Xu , Tao Jia

In recent work, the authors developed a simple method of constructing topological spaces from certain well-behaved partially ordered sets -- those coming from sequences of relations between finite sets. This method associates a given poset…

General Topology · Mathematics 2025-09-11 Adam Bartoš , Tristan Bice , Alessandro Vignati

A well-established research line in structural and algorithmic graph theory is characterizing graph classes by listing their minimal obstructions. When this list is finite for some class $\mathcal C$ we obtain a polynomial-time algorithm…

Combinatorics · Mathematics 2024-01-19 Santiago Guzmán-Pro

The Graph Minor Theorem of Robertson and Seymour asserts that any graph property, whatsoever, is determined by an associated finite list of graphs. We view this as an impressive generalization of Kuratowski's theorem, which characterizes…

Combinatorics · Mathematics 2018-11-27 Thomas W. Mattman

Neural network design has utilized flexible nonlinear processes which can mimic biological systems, but has suffered from a lack of traceability in the resulting network. Graphical probabilistic models ground network design in probabilistic…

Machine Learning · Computer Science 2015-06-19 Kenric P. Nelson , Madalina Barbu , Brian J. Scannell

In areas such as computer software and hardware, manufacturing systems, and transportation, engineers encounter networks with arbitrarily large numbers of isomorphic subprocesses. Parameterized systems provide a framework for modeling such…

Formal Languages and Automata Theory · Computer Science 2016-10-03 M. H. Zibaeenejad , J. G. Thistle

We consider spectral methods that uncover hidden structures in directed networks. We establish and exploit connections between node reordering via (a) minimizing an objective function and (b) maximizing the likelihood of a random graph…

Social and Information Networks · Computer Science 2021-10-12 Xue Gong , Desmond John Higham , Konstantinos Zygalakis

An ordered graph is a graph with a total order over its vertices. A linear layout of an ordered graph is a partition of the edges into sets of either non-crossing edges, called stacks, or non-nesting edges, called queues. The stack (queue)…

Discrete Mathematics · Computer Science 2024-12-18 Deborah Haun , Laura Merker , Sergey Pupyrev

Networks are a fundamental model of complex systems throughout the sciences, and network datasets are typically analyzed through lower-order connectivity patterns described at the level of individual nodes and edges. However, higher-order…

Social and Information Networks · Computer Science 2018-02-21 Austin R. Benson

In network tomography, one goal is to identify a small set of failed links in a network, by sending a few packets through the network and seeing which reach their destination. This problem can be seen as a variant of combinatorial group…

Information Theory · Computer Science 2018-09-12 Bruce Spang , Mary Wootters

Each hereditary property can be characterized by its set of minimal obstructions; these sets are often unknown, or known but infinite. By allowing extra structure it is sometimes possible to describe such properties by a finite set of…

Combinatorics · Mathematics 2021-12-02 Santiago Guzmán-Pro , Pavol Hell , César Hernández-Cruz

We obtain structure theorems for graphs excluding a fan (a path with a universal vertex) or a dipole ($K_{2,k}$) as a topological minor. The corresponding decompositions can be computed in FPT linear time. This is motivated by the study of…

Discrete Mathematics · Computer Science 2025-02-18 Hugo Jacob , William Lochet , Christophe Paul

In this paper, we present a survey of the use of graph theoretical techniques in Biology. In particular, we discuss recent work on identifying and modelling the structure of bio-molecular networks, as well as the application of centrality…

Molecular Networks · Quantitative Biology 2007-05-23 Oliver Mason , Mark Verwoerd

An intense activity is nowadays devoted to the definition of models capturing the properties of complex networks. Among the most promising approaches, it has been proposed to model these graphs via their clique incidence bipartite graphs.…

Discrete Mathematics · Computer Science 2021-03-09 Matthieu Latapy , Thi Ha Duong Phan , Christophe Crespelle , Thanh Qui Nguyen

Link prediction systems (e.g. recommender systems) typically use graph topology as one of their main sources of information. However, automorphisms and related properties of graphs beget inherent limits in predictability. We calculate hard…

Social and Information Networks · Computer Science 2023-06-28 Justus I. Hibshman , Tim Weninger

We introduce diffusively coupled networks where the dynamical system at each vertex is planar Hamiltonian. The problems we address are synchronisation and an analogue of diffusion-driven Turing instability for time-dependent homogeneous…

Chaotic Dynamics · Physics 2017-06-07 David S. Tourigny

The objective of this paper is to study the characteristics (geometric and otherwise) of very large attribute based undirected networks. Real-world networks are often very large and fast evolving. Their analysis and understanding present a…

Applications · Statistics 2015-10-06 Koushiki Sarkar , Diganta Mukherjee