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This work considers the problem of learning the structure of multivariate linear tree models, which include a variety of directed tree graphical models with continuous, discrete, and mixed latent variables such as linear-Gaussian models,…

Machine Learning · Computer Science 2011-11-09 Animashree Anandkumar , Kamalika Chaudhuri , Daniel Hsu , Sham M. Kakade , Le Song , Tong Zhang

We study spanning trees on Sierpinski graphs (i.e., finite approximations to the Sierpinski gasket) that are chosen uniformly at random. We construct a joint probability space for uniform spanning trees on every finite Sierpinski graph and…

Probability · Mathematics 2015-01-14 Masato Shinoda , Elmar Teufl , Stephan Wagner

Markov state models (MSMs) have been demonstrated to be a powerful method for computationally studying intramolecular processes such as protein folding and macromolecular conformational changes. In this article, we present a new approach to…

Biological Physics · Physics 2015-06-18 Matthew R. Perkett , Michael F. Hagan

We consider Markov jump processes describing structured populations with interactions via density dependance. We propose a Markov construction with a distinguished individual which allows to describe the random tree and random sample at a…

Probability · Mathematics 2022-07-20 Vincent Bansaye

Adaptive Markov chain Monte Carlo (MCMC) algorithms, which automatically tune their parameters based on past samples, have proved extremely useful in practice. The self-tuning mechanism makes them `non-Markovian', which means that their…

Probability · Mathematics 2024-08-28 Pietari Laitinen , Matti Vihola

In the critical beta-splitting model of a random $n$-leaf rooted tree, clades are recursively (from the root) split into sub-clades, and a clade of $m$ leaves is split into sub-clades containing $i$ and $m-i$ leaves with probabilities…

Probability · Mathematics 2025-04-21 David J. Aldous , Svante Janson

Visibility graphs are spatial interpretations of time series. When derived from the time evolution of physical systems, the graphs associated with such series may exhibit properties that can reflect aspects such as ergodicity, criticality,…

We introduce generalizations of Aldous' Brownian Continuous Random Tree as scaling limits for multicritical models of discrete trees. These discrete models involve trees with fine-tuned vertex-dependent weights ensuring a k-th root…

Mathematical Physics · Physics 2007-05-23 J. Bouttier , P. Di Francesco , E. Guitter

In this paper we consider large state space continuous time Markov chains (MCs) arising in the field of systems biology. For density dependent families of MCs that represent the interaction of large groups of identical objects, Kurtz has…

Performance · Computer Science 2015-03-04 Alessio Angius , Gianfranco Balbo , Marco Beccuti , Enrico Bibbona , Andras Horvath , Roberta Sirovich

In the critical beta-splitting model of a random $n$-leaf rooted tree, clades are recursively split into sub-clades, and a clade of $m$ leaves is split into sub-clades containing $i$ and $m-i$ leaves with probabilities $\propto 1/(i(m-i))$.…

Probability · Mathematics 2024-12-16 David J. Aldous , Svante Janson

In this work, we study a family of non-Markovian trees modeling populations where individuals live and reproduce independently with possibly time-dependent birth-rate and lifetime distribution. To this end, we use the coding process…

Probability · Mathematics 2018-01-26 Bertrand Cloez , Benoît Henry

We study marginally compact macromolecular trees that are created by means of two different fractal generators. In doing so, we assume Gaussian statistics for the vectors connecting nodes of the trees. Moreover, we introduce bond-bond…

Soft Condensed Matter · Physics 2017-07-18 Maxim Dolgushev , Adrian L. Hauber , Philipp Pelagejcev , Joachim P. Wittmer

We consider the Markov chain approximations for singular stable-like processes. First we obtain properties of some Markov chains. Then we construct the approximating Markov chains and give a necessary condition for weak convergence of these…

Probability · Mathematics 2012-10-11 Fangjun Xu

We consider a sequence of Markov chains $(\mathcal X^n)_{n=1,2,...}$ with $\mathcal X^n = (X^n_\sigma)_{\sigma\in\mathcal T}$, indexed by the full binary tree $\mathcal T = \mathcal T_0 \cup \mathcal T_1 \cup ...$, where $\mathcal T_k$ is…

Probability · Mathematics 2014-06-17 Peter Czuppon , Peter Pfaffelhuber

Higher-order Markov chains are frequently used to model categorical time series. However, a major problem with fitting such models is the exponentially growing number of parameters in the model order. A popular approach to parsimonious…

Methodology · Statistics 2025-07-03 Tuhin Majumder , Soumendra Lahiri , Donald Martin

We prove that a class of one-dimensional maps with an arbitrary number of non-degenerate critical and singular points admits an induced Markov tower with exponential return time asymptotics. In particular the map has an absolutely…

Dynamical Systems · Mathematics 2007-09-13 K. Díaz-Ordaz , M. P. Holland , S. Luzzatto

The theory of ``Markov-up'' processes is being developed. This is a new class of stochastic processes with ``partial'' markovian features; it could also be called ``one-sided Markov''. Such a behavior may be found in the real world and in…

Probability · Mathematics 2024-07-01 D. O. Kalikaeva

We present a construction, called the limit of a tree system of spaces (or, less formally, a tree of spaces). The construction is designed to produce compact metric spaces that resemble fractals, out of more regular spaces, such as closed…

Geometric Topology · Mathematics 2020-09-30 Jacek Swiatkowski

We establish that if a sequence of electrical networks equipped with conductance measures converges in the local Gromov--Hausdorff-vague topology and satisfies certain non-explosion and metric-entropy conditions,then the sequence of…

Probability · Mathematics 2025-11-21 Ryoichiro Noda

Markov networks are models for compactly representing complex probability distributions. They are composed by a structure and a set of numerical weights. The structure qualitatively describes independences in the distribution, which can be…

Machine Learning · Computer Science 2014-07-31 Alejandro Edera , Yanela Strappa , Facundo Bromberg