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Motivation: State-of-the-art biomedical named entity recognition (BioNER) systems often require handcrafted features specific to each entity type, such as genes, chemicals and diseases. Although recent studies explored using neural network…

Information Retrieval · Computer Science 2018-10-09 Xuan Wang , Yu Zhang , Xiang Ren , Yuhao Zhang , Marinka Zitnik , Jingbo Shang , Curtis Langlotz , Jiawei Han

Existing cross-encoder models can be categorized as pointwise, pairwise, or listwise. Pairwise and listwise models allow passage interactions, which typically makes them more effective than pointwise models but less efficient and less…

Evaluating the alignment between textual prompts and generated images is critical for ensuring the reliability and usability of text-to-image (T2I) models. However, most existing evaluation methods rely on coarse-grained metrics or static…

Computer Vision and Pattern Recognition · Computer Science 2026-02-24 Fulin Shi , Wenyi Xiao , Bin Chen , Liang Din , Leilei Gan

Deep learning is still not a very common tool in speaker verification field. We study deep convolutional neural network performance in the text-prompted speaker verification task. The prompted passphrase is segmented into word states - i.e.…

Audio and Speech Processing · Electrical Eng. & Systems 2018-03-15 Sergey Novoselov , Oleg Kudashev , Vadim Schemelinin , Ivan Kremnev , Galina Lavrentyeva

Modern machine learning models excel at detecting individual actions, objects, or scene attributes from short, local observations. However, many real-world tasks, such as in smart cities and healthcare, require reasoning over complex events…

Machine Learning · Computer Science 2025-06-18 Liying Han , Gaofeng Dong , Xiaomin Ouyang , Lance Kaplan , Federico Cerutti , Mani Srivastava

Entity Recognition (ER) within a text is a fundamental exercise in Natural Language Processing, enabling further depending tasks such as Knowledge Extraction, Text Summarisation, or Keyphrase Extraction. An entity consists of single words…

Computation and Language · Computer Science 2021-06-14 Andreas Waldis , Luca Mazzola

Modern systems for automatic speech recognition, including the RNN-Transducer and Attention-based Encoder-Decoder (AED), are designed so that the encoder is not required to alter the time-position of information from the audio sequence into…

Sound · Computer Science 2025-02-11 Adam Stooke , Rohit Prabhavalkar , Khe Chai Sim , Pedro Moreno Mengibar

Entity Matching (EM) involves identifying different data representations referring to the same entity from multiple data sources and is typically formulated as a binary classification problem. It is a challenging problem in data integration…

Computation and Language · Computer Science 2023-05-31 John Bosco Mugeni , Steven Lynden , Toshiyuki Amagasa , Akiyoshi Matono

Expressive text encoders such as RNNs and Transformer Networks have been at the center of NLP models in recent work. Most of the effort has focused on sentence-level tasks, capturing the dependencies between words in a single sentence, or…

Computation and Language · Computer Science 2021-09-15 Manuel Widmoser , Maria Leonor Pacheco , Jean Honorio , Dan Goldwasser

The long-context capability of recent large transformer models can be surmised to rely on techniques such as attention/model parallelism, as well as hardware-level optimizations. While these strategies allow input lengths to scale to…

Computer Vision and Pattern Recognition · Computer Science 2025-07-28 Toufiq Parag , Ahmed Elgammal

We consider the problem of recognizing speech utterances spoken to a device which is generating a known sound waveform; for example, recognizing queries issued to a digital assistant which is generating responses to previous user inputs.…

Audio and Speech Processing · Electrical Eng. & Systems 2021-06-03 Nathan Howard , Alex Park , Turaj Zakizadeh Shabestary , Alexander Gruenstein , Rohit Prabhavalkar

In this paper, we introduce ReasonEmbed, a novel text embedding model developed for reasoning-intensive document retrieval. Our work includes three key technical contributions. First, we propose ReMixer, a new data synthesis method that…

Information Retrieval · Computer Science 2026-04-21 Jianlyu Chen , Junwei Lan , Chaofan Li , Defu Lian , Zheng Liu

Standard decoding approaches for conditional text generation tasks typically search for an output hypothesis with high model probability, but this may not yield the best hypothesis according to human judgments of quality. Reranking to…

Computation and Language · Computer Science 2023-06-02 Prasann Singhal , Jiacheng Xu , Xi Ye , Greg Durrett

Chemotherapeutic response of cancer cells to a given compound is one of the most fundamental information one requires to design anti-cancer drugs. Recent advances in producing large drug screens against cancer cell lines provided an…

Genomics · Quantitative Biology 2018-07-17 Mehmet Tan , Ozan Fırat Özgül , Batuhan Bardak , Işıksu Ekşioğlu , Suna Sabuncuoğlu

Named entity recognition (NER) is a fundamental component in many applications, such as Web Search and Voice Assistants. Although deep neural networks greatly improve the performance of NER, due to the requirement of large amounts of…

Computation and Language · Computer Science 2021-06-02 Shining Liang , Ming Gong , Jian Pei , Linjun Shou , Wanli Zuo , Xianglin Zuo , Daxin Jiang

For languages with no annotated resources, transferring knowledge from rich-resource languages is an effective solution for named entity recognition (NER). While all existing methods directly transfer from source-learned model to a target…

Computation and Language · Computer Science 2020-07-16 Qianhui Wu , Zijia Lin , Guoxin Wang , Hui Chen , Börje F. Karlsson , Biqing Huang , Chin-Yew Lin

To capture user preference, transformer models have been widely applied to model sequential user behavior data. The core of transformer architecture lies in the self-attention mechanism, which computes the pairwise attention scores in a…

Information Retrieval · Computer Science 2024-04-05 Zhen Tian , Wayne Xin Zhao , Changwang Zhang , Xin Zhao , Zhongrui Ma , Ji-Rong Wen

Template based single step retrosynthesis predicts reactants by selecting and applying an explicit reaction template, making each prediction traceable to a chemical transformation rule. This is useful for synthesis planning, but template…

Machine Learning · Computer Science 2026-05-14 Mohammad Jahid Ibna Basher , Ali Khodabandeh Yalabadi , Ivan Garibay , Ozlem Ozmen Garibay

Named Entity Recognition (NER) is a key component in industrial information extraction pipelines, where systems must satisfy strict latency and throughput constraints in addition to strong accuracy. State-of-the-art NER accuracy is often…

Computation and Language · Computer Science 2026-04-23 Andrea Maracani , Savas Ozkan , Junyi Zhu , Sinan Mutlu , Mete Ozay

Syntax-incorporated machine translation models have been proven successful in improving the model's reasoning and meaning preservation ability. In this paper, we propose a simple yet effective graph-structured encoder, the Recurrent Graph…

Computation and Language · Computer Science 2019-08-20 Liang Ding , Dacheng Tao