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Electromagnetic stimulation of the human brain is a key tool for the neurophysiological characterization and diagnosis of several neurological disorders. Transcranial magnetic stimulation (TMS) is one procedure that is commonly used…

Machine Learning · Computer Science 2020-02-04 Essam A. Rashed , Jose Gomez-Tames , Akimasa Hirata

Brain signals are important quantitative data for understanding physiological activities and diseases of human brain. Most existing studies pay attention to supervised learning methods, which, however, require high-cost clinical labels. In…

Signal Processing · Electrical Eng. & Systems 2023-06-26 Donghong Cai , Junru Chen , Yang Yang , Teng Liu , Yafeng Li

Epileptic seizure forecasting is a clinically important yet challenging problem in epilepsy research. Existing approaches predominantly rely on neural signals such as electroencephalography (EEG), which require specialized equipment and…

Computer Vision and Pattern Recognition · Computer Science 2026-03-16 Mingkai Zhai , Wei Wang , Zongsheng Li , Quanying Liu

Understanding sub-cellular protein localisation is an essential component to analyse context specific protein function. Recent advances in quantitative mass-spectrometry (MS) have led to high resolution mapping of thousands of proteins to…

Applications · Statistics 2019-03-12 Oliver M. Crook , Kathryn S. Lilley , Laurent Gatto , Paul D. W. Kirk

Reliable seizure detection is critical for diagnosing and managing epilepsy, yet clinical workflows remain dependent on time-consuming manual EEG interpretation. While machine learning has shown promise, existing approaches often rely on…

Machine Learning · Computer Science 2025-08-12 Bartlomiej Chybowski , Shima Abdullateef , Hollan Haule , Alfredo Gonzalez-Sulser , Javier Escudero

Deep neural networks achieve high accuracy on image classification tasks. Yet, they often produce overconfident predictions as which fail to express epistemic uncertainty, and frequently violate logical or structural constraints present in…

Computer Vision and Pattern Recognition · Computer Science 2026-05-19 Ezel Kilicdere , Shireen Kudukkil Manchingal , Fabio Cuzzolin

Computer Vision for Analyzing and Classifying cells and tissues often require rigorous lab procedures and so automated Computer Vision solutions have been sought. Most work in such field usually requires Feature Extractions before the…

Computer Vision and Pattern Recognition · Computer Science 2018-08-21 Darlington Ahiale Akogo , Vincent Appiah , Xavier-Lewis Palmer

Epilepsy is one of the most common brain diseases that affect more than 1\% of the world's population. It is characterized by recurrent seizures, which come in different types and are treated differently. Electroencephalography (EEG) is…

Signal Processing · Electrical Eng. & Systems 2022-06-09 Hezam Albaqami , Ghulam Mubashar Hassan , Amitava Datta

We tackle classification based on brain connectivity derived from diffusion magnetic resonance images. We propose a machine-learning model inspired by graph convolutional networks (GCNs), which takes a brain connectivity input graph and…

Neurons and Cognition · Quantitative Biology 2023-09-21 Anees Kazi , Jocelyn Mora , Bruce Fischl , Adrian V. Dalca , Iman Aganj

How do mammalian cells that share the same genome exist in notably distinct phenotypes, exhibiting differences in morphology, gene expression patterns, and epigenetic chromatin statuses? Furthermore how do cells of different phenotypes…

Molecular Networks · Quantitative Biology 2014-04-29 Ping Wang , Chaoming Song , Hang Zhang , Zhanghan Wu , Jianhua Xing

In this work, we explore the various Brain Neuron tracking techniques, which is one of the most significant applications of Diffusion Tensor Imaging. Tractography provides us with a non-invasive method to analyze underlying tissue…

Computer Vision and Pattern Recognition · Computer Science 2018-06-12 Nandakishore Puttashamachar , Ulas Bagci

This paper proposes a novel topological learning framework that integrates networks of different sizes and topology through persistent homology. Such challenging task is made possible through the introduction of a computationally efficient…

Neurons and Cognition · Quantitative Biology 2023-01-30 Tananun Songdechakraiwut , Moo K. Chung

We prove that for a broad class of permutation-equivariant learning rules (including SGD, Adam, and others), the training process induces a bi-Lipschitz mapping between neurons and strongly constrains the topology of the neuron distribution…

Machine Learning · Computer Science 2025-10-06 Yongyi Yang , Tomaso Poggio , Isaac Chuang , Liu Ziyin

Automatic classification of epileptic seizure types in electroencephalograms (EEGs) data can enable more precise diagnosis and efficient management of the disease. This task is challenging due to factors such as low signal-to-noise ratios,…

Machine Learning · Computer Science 2020-10-01 Umar Asif , Subhrajit Roy , Jianbin Tang , Stefan Harrer

Self-supervised learning has emerged as a highly effective approach in the fields of natural language processing and computer vision. It is also applicable to brain signals such as electroencephalography (EEG) data, given the abundance of…

Signal Processing · Electrical Eng. & Systems 2024-01-22 Yuqi Chen , Kan Ren , Kaitao Song , Yansen Wang , Yifan Wang , Dongsheng Li , Lili Qiu

Like fingerprints, cortical folding patterns are unique to each brain even though they follow a general species-specific organization. Some folding patterns have been linked with neurodevelopmental disorders. However, due to the high…

Image and Video Processing · Electrical Eng. & Systems 2024-08-14 Louise Guillon , Joël Chavas , Audrey Bénézit , Marie-Laure Moutard , Denis Rivière , Jean-François Mangin

Computer-coded verbal autopsy (CCVA) algorithms predict cause of death from high-dimensional family questionnaire data (verbal autopsies) of a deceased individual. CCVA algorithms are typically trained on non-local data, then used to…

Methodology · Statistics 2019-04-26 Abhirup Datta , Jacob Fiksel , Agbessi Amouzou , Scott Zeger

Accurate segmentation of brain tumors from 3D multimodal MRI is vital for diagnosis and treatment planning across diverse brain tumors. This paper addresses the challenges posed by the BraTS 2023, presenting a unified transfer learning…

Image and Video Processing · Electrical Eng. & Systems 2024-12-12 Ramy A. Zeineldin , Franziska Mathis-Ullrich

Limited availability of labeled physiological data often prohibits the use of powerful supervised deep learning models in the biomedical machine intelligence domain. We approach this problem and propose a novel encoding framework that…

Machine Learning · Computer Science 2023-06-13 Philipp Hallgarten , David Bethge , Ozan Özdenizci , Tobias Grosse-Puppendahl , Enkelejda Kasneci

Correlated electrical activity in neurons is a prominent characteristic of cortical microcircuits. Despite a growing amount of evidence concerning both spike-count and subthreshold membrane potential pairwise correlations, little is known…

Neurons and Cognition · Quantitative Biology 2019-07-29 Daniele Linaro , Gabriel K. Ocker , Brent Doiron , Michele Giugliano