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We measure different contributions to entropy production in a living functional epithelial tissue. We do this by extracting the functional dynamics of development while at the same time quantifying fluctuations. Using the translucent…

Soft Condensed Matter · Physics 2023-01-25 Mark Olenik , Jake Turley , Stephen Cross , Helen Weavers , Paul Martin , Isaac Chenchiah , Tanniemola Liverpool

This paper describes joint work with Oded Schramm and Wendelin Werner establishing the values of the planar Brownian intersection exponents from which one derives the Hausdorff dimension of certain exceptional sets of planar Brownian…

Probability · Mathematics 2007-05-23 Gregory Lawler

Continuum models for the spatial dynamics of growing cell populations have been widely used to investigate the mechanisms underpinning tissue development and tumour invasion. These models consist of nonlinear partial differential equations…

Tissues and Organs · Quantitative Biology 2019-07-15 Mark AJ Chaplain , Tommaso Lorenzi , Fiona R Macfarlane

Localized deformation patterns are a common motif in morphogenesis and are increasingly finding widespread applications in materials science, for instance as memory devices. Here we describe the emergence of spatially localized deformations…

Soft Condensed Matter · Physics 2019-06-12 Thomas C. T. Michaels , Remy Kusters , Alexander J. Dear , Cornelis Storm , James C. Weaver , L. Mahadevan

Interfaces in a model with a single, real nonconserved order parameter and purely dissipative evolution equation are considered. We show that a systematic perturbative approach, called the expansion in width and developed for curved domain…

Soft Condensed Matter · Physics 2009-10-31 H. Arodz , R. Pelka

We investigate the dynamics of a colony of crawling, proliferating cells with a minimal, mechanical cell model. The cells consist of two disks, modelling the cell body and a pseudopod, connected by a finite extensible spring. The cells…

Cell Behavior · Quantitative Biology 2019-04-11 Simon K. Schnyder , John J. Molina , Ryoichi Yamamoto

We study the behavior of self-propelled nano- and micro-rods in three dimensions, confined between two parallel walls, by simulations and scaling arguments. Our simulations include thermal fluctuations and hydrodynamic interactions, which…

Biological Physics · Physics 2009-02-06 Jens Elgeti , Gerhard Gompper

The dynamics of complex systems generally include high-dimensional, non-stationary and non-linear behavior, all of which pose fundamental challenges to quantitative understanding. To address these difficulties we detail a new approach based…

Quantitative Methods · Quantitative Biology 2020-09-11 Antonio Carlos Costa , Tosif Ahamed , Greg J. Stephens

Microorganisms navigate through fluid, often confined by complex environments, to survive and sustain life. Inspired by this fact, we consider a model system and seek to understand the wall curvature driven dynamics of a squirmer, a…

Soft Condensed Matter · Physics 2021-08-25 Chaithanya K. V. S. , Sumesh P. Thampi

A class of solid-on-solid growth models with short range interactions and sequential updates is studied. The models exhibit both smooth and rough phases in dimension d=1. Some of the features of the roughening transition which takes place…

Statistical Mechanics · Physics 2009-10-30 Uri Alon , Martin Evans , Haye Hinrichsen , David Mukamel

We study the genetic interfaces between two species of an expanding colony that consists of individual microorganisms that reproduce and undergo diffusion, both at the frontier and in the interior. Within the bulk of the colony, the genetic…

Biological Physics · Physics 2025-10-28 Jonathan Bauermann , David R. Nelson

We infer upper and lower bounds on the exponential growth constants $\alpha(\Lambda)$, $\alpha_0(\Lambda)$, and $\beta(\Lambda)$ describing the large-$n$ behavior of, respectively, the number of acyclic orientations, acyclic orientations…

Statistical Mechanics · Physics 2019-10-09 Shu-Chiuan Chang , Robert Shrock

Clusters formed by fluctuations of two-dimensional (2D) directed interfaces around a threshold level have been extensively studied at equilibrium and in nonequilibrium steady states, but their coarsening dynamics remain poorly understood.…

Statistical Mechanics · Physics 2026-01-21 Renan A. L. Almeida , Tiago J. Oliveira , Jeferson J. Arenzon , Leticia F. Cugliandolo

According to the classical theory of Brownian motion, the mean squared displacement of diffusing particles evolves linearly with time whereas the distribution of their displacements is Gaussian. However, recent experiments on mesoscopic…

Soft Condensed Matter · Physics 2021-08-24 J. M. Miotto , S. Pigolotti , A. V. Chechkin , S. Roldán-Vargas

We present a unified scaling description for the dynamics of monomers of a semiflexible chain under good solvent condition in the free draining limit. We consider both the cases where the contour length $L$ is comparable to the persistence…

Biological Physics · Physics 2015-06-18 Aiqun Huang , Aniket Bhattacharya , Kurt Binder

We study the asymptotic error arising when approximating the Green's function of a Sturm-Liouville problem through a truncation of its eigenfunction expansion, both for the Green's function of a regular Sturm-Liouville problem and for the…

Classical Analysis and ODEs · Mathematics 2025-08-26 Karen Habermann

Many soft and biological materials display so-called 'soft glassy' dynamics; their constituents undergo anomalous random motions and complex cooperative rearrangements. A recent simulation model of one soft glassy material, a coarsening…

A polymer model given in terms of beads, interacting through Hookean springs and hydrodynamic forces, is studied. Brownian dynamics description of this bead-spring polymer model is extended to multiple resolutions. Using this multiscale…

Chemical Physics · Physics 2018-06-13 Edward Rolls , Radek Erban

In this study, the non-equilibrium free energy corresponding to the curve generated by a modified stochastic Loewner evolution (SLE), which is driven by the Langevin equation, is theoretically investigated. Under certain conditions, we…

Statistical Mechanics · Physics 2023-10-24 Yusuke Shibasaki

We introduce and investigate the stochastic dynamics of the density of local extrema (minima and maxima) of non-equilibrium surface fluctuations. We give a number of exact, analytic results for interface fluctuations described by linear…

Statistical Mechanics · Physics 2009-10-31 Z. Toroczkai , G. Korniss , S. Das Sarma , R. K. P. Zia
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