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Resilient ecological systems will be better able to maintain their structure and function in the emerging Anthropocene. Estimating the resilience of different systems will therefore provide valuable insight for conservation decision-makers,…

Dynamical Systems · Mathematics 2023-06-16 Cailan Jeynes-Smith , Michael Bode , Robyn P. Araujo

A new model ecosystem consisting of many interacting species is introduced. The species are connected through a random matrix with a given connectivity. It is shown that the system is organized close to a boundary of marginal stability in…

adap-org · Physics 2007-05-23 Ricard V. Sole , David Alonso , Alan McKane

Systems describing the long-range interaction between individuals have attracted a lot of attention in the last years, in particular in relation with living systems. These systems are quadratic, written under the form of transport equations…

Analysis of PDEs · Mathematics 2023-06-13 Marie Doumic , Sophie Hecht , Benoit Perthame , Diane Peurichard

Species interactions (ranging from direct predator prey relationships to indirect effects mediated by the environment) are central to ecosystem balance and biodiversity. While empirical methods for measuring these interactions exist, their…

Populations and Evolution · Quantitative Biology 2025-08-27 Javier Aguilar , Samir Suweis , Amos Maritan , Sandro Azaele

Analyzing coexistence and survival scenarios of Lotka-Volterra (LV) networks in which the total biomass is conserved is of vital importance for the characterization of long-term dynamics of ecological communities. Here, we introduce a…

Populations and Evolution · Quantitative Biology 2013-04-26 Johannes Knebel , Torben Krüger , Markus F. Weber , Erwin Frey

We consider the problem of reconstructing the signal and the hidden variables from observations coming from a multi-layer network with rotationally invariant weight matrices. The multi-layer structure models inference from deep generative…

Machine Learning · Statistics 2022-12-06 Yizhou Xu , TianQi Hou , ShanSuo Liang , Marco Mondelli

While generic competitive systems exhibit mixtures of hierarchy and cycles, real-world systems are predominantly hierarchical. We demonstrate and extend a mechanism for hierarchy; systems with similar agents approach perfect hierarchy in…

Populations and Evolution · Quantitative Biology 2024-02-12 Christopher Cebra , Alexander Strang

The consensus that complexity begets stability in ecosystems was challenged in the seventies, a result recently extended to ecologically-inspired networks. The approaches assume the existence of a feasible equilibrium, i.e. with positive…

Populations and Evolution · Quantitative Biology 2016-12-21 Michael Dougoud , Laura Vinckenbosch , Rudolf Rohr , Louis-Félix Bersier , Christian Mazza

Approximate Message Passing (AMP) algorithms are a class of iterative procedures for computationally-efficient estimation in high-dimensional inference and estimation tasks. Due to the presence of an 'Onsager' correction term in its…

Statistics Theory · Mathematics 2023-02-02 Collin Cademartori , Cynthia Rush

On a global level, ecological communities are being perturbed at an unprecedented rate by human activities and environmental instabilities. Yet, we understand little about what factors facilitate or impede long-term persistence of these…

Populations and Evolution · Quantitative Biology 2024-10-24 Johannes Nauta , Manlio De Domenico

The evolutionary mechanisms of cooperative behavior represent a fundamental topic in complex systems and evolutionary dynamics. Real-world collective interactions, particularly in multi-agent systems, are often characterized by…

Adaptation and Self-Organizing Systems · Physics 2026-02-23 Yishen Jiang , Xin Wang , Wenqiang Zhu , Ming Wei , Longzhao Liu , Shaoting Tang , Hongwei Zheng

We study self-organization in a minimally nonlinear model of large random ecosystems. Populations evolve over time according to a piecewise linear system of ordinary differential equations subject to a non-negativity constraint resulting in…

Adaptation and Self-Organizing Systems · Physics 2026-01-05 Frederik J. Thomsen , Johan L. A. Dubbeldam , Rudolf Hanel

The distributions of species lifetimes and species in space are related, since species with good local survival chances have more time to colonize new habitats and species inhabiting large areas have higher chances to survive local…

Populations and Evolution · Quantitative Biology 2019-02-18 Tobias Rogge , David Jones , Barbara Drossel , Korinna T. Allhoff

Ecosystems represent archetypal complex dynamical systems, often modelled by coupled differential equations of the form $$ \frac{d x_i}{d t} = x_i \varphi_i(x_1,\cdots, x_N)\ , $$ where $N$ represents the number of species and $x_i$, the…

Populations and Evolution · Quantitative Biology 2022-12-13 Imane Akjouj , Matthieu Barbier , Maxime Clenet , Walid Hachem , Mylène Maïda , François Massol , Jamal Najim , Viet Chi Tran

Group formation and coordination are fundamental characteristics of living systems, essential for performing tasks and ensuring survival. Interactions between individuals play a key role in group formation, and the impact of resource…

Individual species may experience diverse outcomes, from prosperity to extinction, in an ecological community subject to external and internal variations. Despite the wealth of theoretical results derived from random matrix ensembles, a…

Populations and Evolution · Quantitative Biology 2024-06-12 Andrus Giraldo , Deok-Sun Lee

We investigate the replicator dynamics with "sparse" symmetric interactions which represent specialist-specialist interactions in ecological communities. By considering a large self interaction $u$, we conduct a perturbative expansion which…

Populations and Evolution · Quantitative Biology 2016-09-21 Tomoyuki Obuchi , Yoshiyuki Kabashima , Kei Tokita

The maintenance of diversity, the `commonness of rarity', and compositional turnover are ubiquitous features of species-rich communities. Through a minimal model, we consider how these features reflect the interplay between environmental…

Populations and Evolution · Quantitative Biology 2025-12-04 Emil Mallmin , Arne Traulsen , Silvia De Monte

Beyond specific settings, many multi-agent learning algorithms fail to converge to an equilibrium solution, instead displaying complex, non-stationary behaviours such as recurrent or chaotic orbits. In fact, recent literature suggests that…

Multiagent Systems · Computer Science 2026-02-12 Dan Leonte , Aamal Hussain , Raphael Huser , Francesco Belardinelli , Dario Paccagnan

The presence of one or more species at some spatial locations but not others is a central matter in ecology. This phenomenon is related to ecological pattern formation. Nonlocal interactions can be considered as one of the mechanisms…

Populations and Evolution · Quantitative Biology 2017-12-29 Ozgur Aydogmus