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Sequential Monte Carlo methods are typically not straightforward to implement on parallel architectures. This is because standard resampling schemes involve communication between all particles. The $\alpha$-sequential Monte Carlo method was…

Statistics Theory · Mathematics 2022-02-21 Deborshee Sen

Transitions to absorbing states are of fundamental importance in non-equilibrium physics as well as ecology. In ecology, absorbing states correspond to the extinction of species. We here study the spatial population dynamics of three…

Populations and Evolution · Quantitative Biology 2014-05-27 Steffen Rulands , Alejandro Zielinski , Erwin Frey

There is mounting empirical evidence that many communities of living organisms display key features which closely resemble those of physical systems at criticality. We here introduce a minimal model framework for the dynamics of a community…

Biological Physics · Physics 2020-02-17 Fabio Peruzzo , Mauro Mobilia , Sandro Azaele

Accelerating global biodiversity loss has highlighted the role of complex relationships and shared patterns among species in determining their responses to environmental changes. The structure of an ecological community, represented by…

Applications · Statistics 2025-09-03 Braden Scherting , Otso Ovaskainen , David B. Dunson

A dynamical model of an ecological community is analyzed within a "mean-field approximation" in which one of the species interacts with the combination of all of the other species in the community. Within this approximation the model may be…

Adaptation and Self-Organizing Systems · Physics 2009-10-31 Alan McKane , David Alonso , Ricard V. Sole

We introduce the first analytical model of asymmetric community dynamics to yield Hubbell's neutral theory in the limit of functional equivalence among all species. Our focus centers on an asymmetric extension of Hubbell's local community…

Populations and Evolution · Quantitative Biology 2010-12-06 Andrew E. Noble , Nico M. Temme , William F. Fagan , Timothy H. Keitt

Economic and ecological models can be extremely complex, with a large number of agents/species each featuring multiple interacting dynamical quantities. In an attempt to understand the generic stability properties of such systems, we define…

Disordered Systems and Neural Networks · Physics 2025-04-15 Nirbhay Patil , Fabian Aguirre-Lopez , Jean-Philippe Bouchaud

We consider a dynamical system obtained by the random switching between $N$ Lotka-Volterra food chains. Our key assumption will be that at least two vector fields only differ on the resources allocated to the growth rate of the first…

Probability · Mathematics 2023-02-27 Antoine Bourquin

Stochastic models of diffusion with excluded-volume effects are used to model many biological and physical systems at a discrete level. The average properties of the population may be described by a continuum model based on partial…

Chemical Physics · Physics 2012-12-20 Maria Bruna , S. Jonathan Chapman

Correlations and other collective phenomena in a schematic model of heterogeneous binary agents (individual spin-glass samples) are considered on the complete graph and also on 2d and 3d regular lattices. The system's stochastic dynamics is…

Disordered Systems and Neural Networks · Physics 2014-02-25 Imre Kondor , István Csabai , Gábor Papp , Enys Mones , Gábor Czimbalmos , Máté Csaba Sándor

We study a class of Approximate Message Passing (AMP) algorithms for symmetric and rectangular spiked random matrix models with orthogonally invariant noise. The AMP iterates have fixed dimension $K \geq 1$, a multivariate non-linearity is…

Statistics Theory · Mathematics 2024-06-14 Xinyi Zhong , Tianhao Wang , Zhou Fan

In this work, we consider a system of differential equations modeling the dynamics of some populations of preys and predators, moving in space according to rapidly oscillating time-dependent transport terms, and interacting with each other…

Analysis of PDEs · Mathematics 2015-12-08 Francois Castella , Philippe Chartier , Julie Sauzeau

Climate change is reshaping species interactions and movement across fragmented landscapes. Despite this, most mathematical models assume random diffusion, overlooking the influence of directed movement. Here, we develop a graph based…

Dynamical Systems · Mathematics 2026-04-08 Pranali Roy Chowdhury , Soumyendu Raha

Ecological systems are governed by complex interactions which are mainly nonlinear. In order to capture this complexity and nonlinearity, statistical models recently gained popularity. However, although these models are commonly applied in…

Quantitative Methods · Quantitative Biology 2011-07-29 Can Ozan Tan , Uygar Ozesmi , Meryem Beklioglu , Esra Per , Bahtiyar Kurt

We investigate a class of models for opinion dynamics in a population with two interacting families of individuals. Each family has an intrinsic mean field "Voter-like" dynamics which is influenced by interaction with the other family. The…

Probability · Mathematics 2018-11-16 Michele Aleandri , Ida G. Minelli

In food webs, many interacting species coexist despite the restrictions imposed by the competitive exclusion principle and apparent competition. For the generalized Lotka-Volterra equations, sustainable coexistence necessitates nonzero…

Populations and Evolution · Quantitative Biology 2015-06-18 Jan O. Haerter , Namiko Mitarai , Kim Sneppen

Ecological systems are studied using many different approaches and mathematical tools. One approach, based on the Jacobian of Lotka-Volterra type models, has been a staple of mathematical ecology for years, leading to many ideas such as on…

Populations and Evolution · Quantitative Biology 2021-06-25 Michael Thorne

The significant role of space in maintaining species coexistence and determining community structure and function is well established. However, community ecology studies have mainly focused on simple competition and predation systems, and…

Populations and Evolution · Quantitative Biology 2010-08-09 Elise Filotas , Martin Grant , Lael Parrott , Per Arne Rikvold

Molecular Dynamics (MD) simulations of standard systems of interacting particles ("atoms") give excellent agreement with the equipartition theorem for the average energy, but we find that these simulations exhibit finite-size effects in the…

Computational Physics · Physics 2020-01-29 Ralph V. Chamberlin , Vladimiro Mujica , Sergei Izvyekov , James P. Larentzos

We introduce a random matrix framework for studying statistical-mechanical lattice systems through spectral observables. Equilibrium configurations sampled from a Boltzmann measure are mapped to matrix ensembles whose covariance structure…

Disordered Systems and Neural Networks · Physics 2026-05-21 Yaprak Önder , Abbas Ali Saberi , Roderich Moessner
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