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Bridging biomolecular modeling with natural language information, particularly through large language models (LLMs), has recently emerged as a promising interdisciplinary research area. LLMs, having been trained on large corpora of…

Computation and Language · Computer Science 2024-11-04 Carl Edwards , Ziqing Lu , Ehsan Hajiramezanali , Tommaso Biancalani , Heng Ji , Gabriele Scalia

As large language models (LLMs) are increasingly applied to scientific reasoning, the complexity of answer formats and the diversity of equivalent expressions make answer verification a critical yet challenging task. Existing verification…

Artificial Intelligence · Computer Science 2025-09-30 Shenghe Zheng , Chenyu Huang , Fangchen Yu , Junchi Yao , Jingqi Ye , Tao Chen , Yun Luo , Ning Ding , LEI BAI , Ganqu Cui , Peng Ye

Recent advances in large language models (LLMs) have fundamentally reshaped speech-to-speech (S2S) systems, enabling increasingly natural spoken interaction. However, existing benchmarks still rely heavily on text-based evaluation and…

Computation and Language · Computer Science 2026-05-11 Feng Jiang , Zhiyu Lin , Yiyang Liu , Liumeng Xue , Fan Bu , Yuhao Du , Xiangying Chen , Benyou Wang , Haizhou Li

Evaluating the reasoning abilities of large language models (LLMs) is challenging. Existing benchmarks often depend on static datasets, which are vulnerable to data contamination and may get saturated over time, or on binary live human…

Artificial Intelligence · Computer Science 2025-02-18 Lanxiang Hu , Qiyu Li , Anze Xie , Nan Jiang , Ion Stoica , Haojian Jin , Hao Zhang

Modern Large Language Models (LLMs) have showcased remarkable prowess in various tasks necessitating sophisticated cognitive behaviors. Nevertheless, a paradoxical performance discrepancy is observed, where these models underperform in…

Computation and Language · Computer Science 2024-04-05 Yuchen Fan , Yantao Liu , Zijun Yao , Jifan Yu , Lei Hou , Juanzi Li

Large language models (LLMs) deployed in real-world agentic applications must be capable of replanning and adapting when mid-task disruptions invalidate their prior decisions. Existing dynamic benchmarks primarily measure whether LLMs can…

Computation and Language · Computer Science 2026-05-19 Tingfeng Hui , Hao Xu , Pengyu Zhu , Hongsheng Xin , Kun Zhan , Sen Su , Chunxiao Liu , Ning Miao

As Large Language Models (LLMs) achieve significant breakthroughs in complex reasoning tasks, evaluating their proficiency in science, technology, engineering, and mathematics (STEM) has become a primary method for measuring machine…

Computation and Language · Computer Science 2026-02-04 Xuzhao Li , Xuchen Li , Jian Zhao , Shiyu Hu

Large language models (LLMs) have demonstrated remarkable advancements, primarily due to their capabilities in modeling the hidden relationships within text sequences. This innovation presents a unique opportunity in the field of life…

Genomics · Quantitative Biology 2024-12-25 Cong Li , Qingqing Long , Yuanchun Zhou , Meng Xiao

Existing long-context benchmarks for Large Language Models (LLMs) focus on evaluating comprehension of long inputs, while overlooking the evaluation of long reasoning abilities. To address this gap, we introduce LongReasonArena, a benchmark…

Computation and Language · Computer Science 2025-08-28 Jiayu Ding , Shuming Ma , Lei Cui , Nanning Zheng , Furu Wei

Large language models (LLMs) have shown promise in providing scalable mental health support, while evaluating their counseling capability remains crucial to ensure both efficacy and safety. Existing evaluations are limited by the static…

Computation and Language · Computer Science 2025-05-07 Shijing Zhu , Zhuang Chen , Guanqun Bi , Binghang Li , Yaxi Deng , Dazhen Wan , Libiao Peng , Xiyao Xiao , Rongsheng Zhang , Tangjie Lv , Zhipeng Hu , FangFang Li , Minlie Huang

We introduce SLR, an end-to-end framework for systematic evaluation and training of Large Language Models (LLMs) via Scalable Logical Reasoning. Given a user's task specification, SLR automatically synthesizes (i) an instruction prompt for…

The recent explosion of large language models (LLMs), each with its own general or specialized strengths, makes scalable, reliable benchmarking more urgent than ever. Standard practices nowadays face fundamental trade-offs: closed-ended…

The evolution of Artificial Intelligence (AI) has been significantly accelerated by advancements in Large Language Models (LLMs) and Large Multimodal Models (LMMs), gradually showcasing potential cognitive reasoning abilities in…

Geographic reasoning is a fundamental cognitive capability that requires models to infer plausible locations by synthesizing visual evidence with spatial world knowledge. Despite recent advances in large vision-language models (LVLMs),…

Computer Vision and Pattern Recognition · Computer Science 2026-04-21 Pengyue Jia , Yingyi Zhang , Xiangyu Zhao , Sharon Li

Large language models (LLMs) have demonstrated significant potential in advancing various fields of research and society. However, the current community of LLMs overly focuses on benchmarks for analyzing specific foundational skills (e.g.…

Large language models (LLMs) are playing an increasingly important role in scientific research, yet there remains a lack of comprehensive benchmarks to evaluate the breadth and depth of scientific knowledge embedded in these models. To…

Computation and Language · Computer Science 2025-10-08 Kehua Feng , Xinyi Shen , Weijie Wang , Xiang Zhuang , Yuqi Tang , Qiang Zhang , Keyan Ding

Variant and gene interpretation are fundamental to personalized medicine and translational biomedicine. However, traditional approaches are manual and labor-intensive. Generative language models (LMs) can facilitate this process,…

Artificial Intelligence · Computer Science 2025-10-15 Owen Queen , Harrison G. Zhang , James Zou

Tool-augmented large language models (LLMs) must tightly couple multi-step reasoning with external actions, yet existing benchmarks often confound this interplay with complex environment dynamics, memorized knowledge or dataset…

Artificial Intelligence · Computer Science 2026-03-20 Wanjia Zhao , Ludwig Schmidt , James Zou , Vidhisha Balachandran , Lingjiao Chen

Large language models (LLMs), as a novel information technology, are seeing increasing adoption in the Architecture, Engineering, and Construction (AEC) field. They have shown their potential to streamline processes throughout the building…

Computation and Language · Computer Science 2026-02-17 Chen Liang , Zhaoqi Huang , Haofen Wang , Fu Chai , Chunying Yu , Huanhuan Wei , Zhengjie Liu , Yanpeng Li , Hongjun Wang , Ruifeng Luo , Xianzhong Zhao

Recent advances in large language models (LLMs) have demonstrated impressive reasoning capacities that mirror human-like thinking. However, whether LLMs possess genuine fluid intelligence (i.e., the ability to reason abstractly and…

Artificial Intelligence · Computer Science 2025-09-30 Yue Yang , MingKang Chen , Qihua Liu , Mengkang Hu , Qiguang Chen , Gengrui Zhang , Shuyue Hu , Guangtao Zhai , Yu Qiao , Yu Wang , Wenqi Shao , Ping Luo