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The derivation of density functional energies from the random phase approximation of self-consistent mean field theory is generalized and applied to a binary blend of diblock copolymers and homopolymers. A nonlocal transformation is…

Soft Condensed Matter · Physics 2023-07-04 Sulin Wang , Yuan Chen , Zengqiang Tan , Keith Promislow

In this fluid dynamics video we explore an array of different possible dynamics for a flexible filament sedimenting in a viscous fluid. The time-dependent shapes and trajectories of the filament are determined analytically and numerically…

Fluid Dynamics · Physics 2013-10-03 Harishankar Manikantan , Lei Li , David Saintillan , Saverio E. Spagnolie

We introduce a simulation strategy to consistently couple continuum biomembrane dynamics to the motion of discrete biological macromolecules residing within or on the membrane. The methodology is used to study the diffusion of integral…

Soft Condensed Matter · Physics 2009-05-26 Ali Naji , Paul J. Atzberger , Frank L. H. Brown

We present dynamical density functional theory results for the time evolution of the density distribution of a sedimenting model two-dimensional binary mixture of colloids. The interplay between the bulk phase behaviour of the mixture, its…

Soft Condensed Matter · Physics 2015-06-17 Alexandr Malijevsky , Andrew J. Archer

We investigate the dynamics of a phase-separating binary fluid, containing colloidal dumbbells anchored to the fluid-fluid interface. Extensive Lattice Boltzmann-Immersed Boundary method simulations reveal that the presence of soft…

Soft Condensed Matter · Physics 2022-01-20 A. Tiribocchi , F. Bonaccorso , M. Lauricella , S. Melchionna , A. Montessori , S. Succi

Using numerical simulations, we investigate the gravitational evolution of filamentary molecular cloud structures and their condensation into dense protostellar cores. One possible process is the so called 'edge effect', the pile-up of…

Astrophysics of Galaxies · Physics 2023-04-06 Elena Hoemann , Stefan Heigl , Andreas Burkert

We incorporate the role of free volume in the density function of the amorphous structure and study its effects on the stability of such structures. The Density Functional Theory is used to explore this ``Free Volume Model'' of the…

Statistical Mechanics · Physics 2009-11-07 Charanbir kaur , Shankar P. Das

Structure, function and dynamics of many biomolecular systems can be characterized by the energetic variational principle and the corresponding systems of partial differential equations (PDEs). This principle allows us to focus on the…

Numerical Analysis · Mathematics 2016-11-03 Guo-Wei Wei , Y. C. Zhou

We study the deformations of elastic filaments confined within slowly-shrinking circular boundaries, under contact forces with friction. We perform computations with a spring-lattice model that deforms like a thin inextensible filament of…

Soft Condensed Matter · Physics 2022-02-23 Silas Alben

We present the spectral analysis of three-dimensional dynamics of an elastic filament in a shear flow of a viscous fluid at a low Reynolds number in the absence of Brownian motion. The elastica model is used. The fiber initially is almost…

Fluid Dynamics · Physics 2023-07-14 Lujia Liu , Pawel Sznajder , Maria L. Ekiel-Jezewska

We develop and present a unified multi-scale model (involving three scales of spatial organisation) to study the dynamics of rigid aggregating particles suspended in a viscous fluid medium and subject to a steady poiseuille flow. At…

Soft Condensed Matter · Physics 2016-10-10 Sarthok Sircar , Anthony J. Roberts

This paper discusses the free energy of complex dislocation microstructures, which is a fundamental property of continuum plasticity. In the past, multiple models of the self energy of dislocations have been proposed in the literature that…

Materials Science · Physics 2015-12-10 Christoph Begau , Godehard Sutmann , Alexander Hartmaier

We compare predictions from two familiar models of the metastable supercooled liquid respectively constructed with thermodynamic and dynamic approach. In the so called density functional theory (DFT) the free energy $F[\rho]$ of the liquid…

Statistical Mechanics · Physics 2016-04-20 Leishangthem Premkumar , Neeta Bidhoodi , Shankar P. Das

A cell membrane can be simply regarded as composite material consisting of lipid bilayer, membrane cytoskeleton beneath lipid bilayer, and proteins embedded in lipid bilayer and linked with membrane cytoskeleton if one only concerns its…

Other Quantitative Biology · Quantitative Biology 2007-06-26 Z. C. Tu , R. An , Z. C. Ou-Yang

In this work, we study a phase-field model for curvature-driven pattern formation in biomembranes. The model is derived as a gradient flow of an energy functional that approximates the two-phase Canham--Helfrich energy. This leads to a…

Analysis of PDEs · Mathematics 2025-11-27 Patrik Knopf , Anastasija Pešić , Dennis Trautwein

Some dynamical properties present in a problem concerning the acceleration of particles in a wave packet are studied. The dynamics of the model is described in terms of a two-dimensional area preserving map. We show that the phase space is…

Chaotic Dynamics · Physics 2011-09-14 Diego F. M. Oliveira , Marko Robnik , Edson D. Leonel

We propose a continuum model to describe the molecular alignment in thin nematic shells. By contrast with previous accounts, the two-dimensional free energy, aimed at describing the physics of thin films of nematics deposited on curved…

Soft Condensed Matter · Physics 2012-06-19 Gaetano Napoli , Luigi Vergori

The entropy of a polymer confined in a curved surface and the elastic free energy of a membrane consisting of polymers are obtained by scaling analysis. It is found that the elastic free energy of the membrane has the form of the in-plane…

Soft Condensed Matter · Physics 2007-05-23 Z. C. Tu , L. Q. Ge , J. B. Li , Z. C. Ou-Yang

The importance of fluid-elastic forces in tube bundle vibrations can hardly be over-emphasized, in view of their damaging potential. In the last decades, advanced models for representing fluid-elastic coupling have therefore been developed…

Fluid Dynamics · Physics 2021-01-29 Romain Lagrange , Philippe Piteau , Xavier Delaune , Jose Antunes

We investigate dynamics of large scale and slow deformations of layered structures. Starting from the respective model equations for a non-conserved system, a conserved system and a binary fluid, we derive the interface equations which are…

Soft Condensed Matter · Physics 2009-10-30 Takao Ohta , David Jasnow