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Evolutionary game theory has proved to be a powerful tool to probe the self-organisation of collective behaviour by considering frequency-dependent fitness in evolutionary processes. It has shown that the stability of a strategy depends not…

Populations and Evolution · Quantitative Biology 2023-01-11 Diogo L. Pires , Mark Broom

We consider an asexual population under strong selection-weak mutation conditions evolving on rugged fitness landscapes with many local fitness peaks. Unlike the previous studies in which the initial fitness of the population is assumed to…

Populations and Evolution · Quantitative Biology 2011-11-18 Kavita Jain , Sarada Seetharaman

Darwinian evolution can be illustrated as an uphill walk in a landscape, where the surface consists of genotypes, the height coordinates represent fitness, and each step corresponds to a point mutation. Epistasis, roughly defined as the…

Quantitative Methods · Quantitative Biology 2013-05-08 Kristina Crona

Recently a mechanism called stagnation detection was proposed that automatically adjusts the mutation rate of evolutionary algorithms when they encounter local optima. The so-called $SD-(1+1)EA$ introduced by Rajabi and Witt (GECCO 2020)…

Neural and Evolutionary Computing · Computer Science 2021-04-19 Amirhossein Rajabi , Carsten Witt

We study a continuous time model for the frequency distribution of an infinitely large asexual population in which both beneficial and deleterious mutations occur and the fitness is additive. When beneficial mutations are ignored, the exact…

Populations and Evolution · Quantitative Biology 2016-10-27 Kavita Jain , Sona John

The $(1+(\lambda,\lambda))$ genetic algorithm is a bright example of an evolutionary algorithm which was developed based on the insights from theoretical findings. This algorithm uses crossover, and it was shown to asymptotically outperform…

Neural and Evolutionary Computing · Computer Science 2020-05-12 Anton Bassin , Maxim Buzdalov

We consider a fixed size population that undergoes an evolutionary adaptation in the weak mutuation rate limit, which we model as a biased Langevin process in the genotype space. We show analytically and numerically that, if the fitness…

Populations and Evolution · Quantitative Biology 2014-02-04 Jakub Otwinowski , Sorin Tanase-Nicola , Ilya Nemenman

Evolutionary algorithms are well suited for solving the knapsack problem. Some empirical studies claim that evolutionary algorithms can produce good solutions to the 0-1 knapsack problem. Nonetheless, few rigorous investigations address the…

Neural and Evolutionary Computing · Computer Science 2014-10-07 Jun He , Boris Mitavskiy , Yuren Zhou

When a problem instance is perturbed by a small modification, one would hope to find a good solution for the new instance by building on a known good solution for the previous one. Via a rigorous mathematical analysis, we show that…

Neural and Evolutionary Computing · Computer Science 2019-04-17 Benjamin Doerr , Carola Doerr , Frank Neumann

One of the easiest randomized greedy optimization algorithms is the following evolutionary algorithm which aims at maximizing a boolean function $f:\{0,1\}^n \to {\mathbb R}$. The algorithm starts with a random search point $\xi \in…

Combinatorics · Mathematics 2017-11-16 Johannes Lengler , Angelika Steger

Most human tumors result from the accumulation of multiple genetic and epigenetic alterations in a single cell. Mutations that confer a fitness advantage to the cell are known as driver mutations and are causally related to tumorigenesis.…

Probability · Mathematics 2010-07-15 Rick Durrett , Jasmine Foo , Kevin Leder , John Mayberry , Franziska Michor

The interrelationships of the fundamental biological processes natural selection, mutation, and stochastic drift are quantified by the entropy rate of Moran processes with mutation, measuring the long-run variation of a Markov process. The…

Dynamical Systems · Mathematics 2014-01-14 Marc Harper

We consider a general class of Markovian models describing the growth in a randomly fluctuating environment of a clonal biological population having several phenotypes related by stochastic switching. Phenotypes differ e.g. by the level of…

Populations and Evolution · Quantitative Biology 2022-01-25 J. Unterberger

In the empirical study of evolutionary algorithms, the solution quality is evaluated by either the fitness value or approximation error. The latter measures the fitness difference between an approximation solution and the optimal solution.…

Neural and Evolutionary Computing · Computer Science 2018-10-30 Jun He , Yu Chen , Yuren Zhou

Explaining to what extent the real power of genetic algorithms lies in the ability of crossover to recombine individuals into higher quality solutions is an important problem in evolutionary computation. In this paper we show how the…

Neural and Evolutionary Computing · Computer Science 2017-08-28 Dogan Corus , Pietro S. Oliveto

We study the evolutionary dynamics of an asexual population of nonmutators and mutators on a class of epistatic fitness landscapes. We consider the situation in which all mutations are deleterious and mutators are produced from nonmutators…

Populations and Evolution · Quantitative Biology 2013-05-08 Kavita Jain , Apoorva Nagar

This paper presents two different efficiency-enhancement techniques for probabilistic model building genetic algorithms. The first technique proposes the use of a mutation operator which performs local search in the sub-solution…

Neural and Evolutionary Computing · Computer Science 2007-05-23 Kumara Sastry , David E. Goldberg , Martin Pelikan

Given a set $I \subseteq \mathbb{N}$, consider the sequences $\{d_n(I)\},\{p_n(I)\}$ where for any $n$, $d_n(I)$ and $p_n(I)$ respectively count the number of permutations in the symmetric group $\mathfrak{S}_n$ whose descent set…

Combinatorics · Mathematics 2025-09-23 Mohamed Omar , Justin M. Troyka

We study the adaptation dynamics of an initially maladapted asexual population with genotypes represented by binary sequences of length $L$. The population evolves in a maximally rugged fitness landscape with a large number of local optima.…

Populations and Evolution · Quantitative Biology 2007-05-23 Kavita Jain , Joachim Krug

The performance of deep neural networks, such as Deep Belief Networks formed by Restricted Boltzmann Machines (RBMs), strongly depends on their training, which is the process of adjusting their parameters. This process can be posed as an…

Neural and Evolutionary Computing · Computer Science 2019-07-16 S. Ivvan Valdez , Alfonso Rojas-Domínguez