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Modelling the complex spatiotemporal patterns of large-scale brain dynamics is crucial for neuroscience, but traditional methods fail to capture the rich structure in modalities such as magnetoencephalography (MEG). Recent advances in deep…

Machine Learning · Computer Science 2025-10-22 Rukuang Huang , Sungjun Cho , Chetan Gohil , Oiwi Parker Jones , Mark Woolrich

Foundation models are reshaping EEG analysis, yet an important problem of EEG tokenization remains a challenge. This paper presents TFM-Tokenizer, a novel tokenization framework that learns a vocabulary of time-frequency motifs from…

Machine Learning · Computer Science 2026-05-15 Jathurshan Pradeepkumar , Xihao Piao , Zheng Chen , Jimeng Sun

Tokenization is fundamental in assembly code analysis, impacting intrinsic characteristics like vocabulary size, semantic coverage, and extrinsic performance in downstream tasks. Despite its significance, tokenization in the context of…

Artificial Intelligence · Computer Science 2025-11-07 Ahmed Mostafa , Raisul Arefin Nahid , Samuel Mulder

Tokenization is associated with many poorly understood shortcomings in language models (LMs), yet remains an important component for long sequence scaling purposes. This work studies how tokenization impacts model performance by analyzing…

Computation and Language · Computer Science 2025-04-15 Buu Phan , Brandon Amos , Itai Gat , Marton Havasi , Matthew Muckley , Karen Ullrich

Neuron segmentation from electron microscopy (EM) volumes is crucial for understanding brain circuits, yet the complex neuronal structures in high-resolution EM images present significant challenges. EM data exhibits unique characteristics…

Computer Vision and Pattern Recognition · Computer Science 2025-08-26 Yinda Chen , Haoyuan Shi , Xiaoyu Liu , Te Shi , Ruobing Zhang , Dong Liu , Zhiwei Xiong , Feng Wu

Electroencephalography provides a non-invasive window into brain activity, offering valuable insights for neurological research, brain-computer interfaces, and clinical diagnostics. However, the development of robust machine learning models…

Signal Processing · Electrical Eng. & Systems 2025-02-26 Chi-Sheng Chen , Ying-Jung Chen , Aidan Hung-Wen Tsai

Large language models (LLMs) have achieved impressive results in natural language processing but are prone to memorizing portions of their training data, which can compromise evaluation metrics, raise privacy concerns, and limit…

Machine Learning · Computer Science 2024-12-03 Eduardo Slonski

Representing continuous time is a critical and under-explored challenge in modeling temporal event sequences with large language models (LLMs). Various strategies like byte-level representations or calendar tokens have been proposed.…

Computation and Language · Computer Science 2026-05-12 Zefang Liu , Nam H. Nguyen , Yinzhu Quan , Shi-Xiong Zhang

Modern tokenizers employ deterministic algorithms to map text into a single "canonical" token sequence, yet the same string can be encoded as many non-canonical tokenizations using the tokenizer vocabulary. In this work, we investigate the…

Computation and Language · Computer Science 2026-02-04 Brian Siyuan Zheng , Alisa Liu , Orevaoghene Ahia , Jonathan Hayase , Yejin Choi , Noah A. Smith

Machine learning techniques have enabled researchers to leverage neuroimaging data to decode speech from brain activity, with some amazing recent successes achieved by applications built using invasive devices. However, research requiring…

Machine Learning · Computer Science 2024-10-29 Jeremiah Ridge , Oiwi Parker Jones

As a cornerstone in language modeling, tokenization involves segmenting text inputs into pre-defined atomic units. Conventional statistical tokenizers often disrupt constituent boundaries within words, thereby corrupting semantic…

Computation and Language · Computer Science 2025-07-11 Qingyang Zhu , Xiang Hu , Pengyu Ji , Wei Wu , Kewei Tu

Foundation models trained with self-supervised objectives are increasingly applied to brain recordings, but autoregressive generation of realistic multichannel neural time series remains comparatively underexplored, particularly for…

Machine Learning · Computer Science 2026-01-29 Richard Csaky , Mats W. J. van Es , Oiwi Parker Jones , Mark Woolrich

Speech tokenization serves as the foundation of speech language model (LM), enabling them to perform various tasks such as spoken language modeling, text-to-speech, speech-to-text, etc. Most speech tokenizers are trained independently of…

Computation and Language · Computer Science 2024-09-11 Arnon Turetzky , Yossi Adi

Tokenization is an understudied and often neglected component of modern LLMs. Most published works use a single tokenizer for all experiments, often borrowed from another model, without performing ablations or analysis to optimize…

Computation and Language · Computer Science 2024-02-08 Gautier Dagan , Gabriel Synnaeve , Baptiste Rozière

As opposed to general English, many concepts in biomedical terminology have been designed in recent history by biomedical professionals with the goal of being precise and concise. This is often achieved by concatenating meaningful…

Computation and Language · Computer Science 2023-07-11 Bernal Jiménez Gutiérrez , Huan Sun , Yu Su

This paper presents a comprehensive study on the tokenization techniques employed by state-of-the-art large language models (LLMs) and their implications on the cost and availability of services across different languages, especially low…

Computation and Language · Computer Science 2024-10-07 Abrar Rahman , Garry Bowlin , Binit Mohanty , Sean McGunigal

Modern large language models (LLMs) excel at tasks that require storing and retrieving knowledge, such as factual recall and question answering. Transformers are central to this capability because they can encode information during training…

Machine Learning · Statistics 2026-03-18 Nuri Mert Vural , Alberto Bietti , Mahdi Soltanolkotabi , Denny Wu

Machine unlearning has emerged as a critical capability for addressing privacy, safety, and regulatory concerns in large language models (LLMs). Existing methods operate at the sequence level, applying uniform updates across all tokens…

Computation and Language · Computer Science 2026-05-07 Jiawei Wu , Doudou Zhou

Self-supervised learning has emerged as a highly effective approach in the fields of natural language processing and computer vision. It is also applicable to brain signals such as electroencephalography (EEG) data, given the abundance of…

Signal Processing · Electrical Eng. & Systems 2024-01-22 Yuqi Chen , Kan Ren , Kaitao Song , Yansen Wang , Yifan Wang , Dongsheng Li , Lili Qiu

In this work, we significantly enhance masked particle modeling (MPM), a self-supervised learning scheme for constructing highly expressive representations of unordered sets relevant to developing foundation models for high-energy physics.…

High Energy Physics - Phenomenology · Physics 2024-10-02 Matthew Leigh , Samuel Klein , François Charton , Tobias Golling , Lukas Heinrich , Michael Kagan , Inês Ochoa , Margarita Osadchy
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