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The framework of Bodlaender et al. (ICALP 2008) and Fortnow and Santhanam (STOC 2008) allows us to exclude the existence of polynomial kernels for a range of problems under reasonable complexity-theoretical assumptions. However, there are…

Computational Complexity · Computer Science 2015-03-19 Danny Hermelin , Stefan Kratsch , Karolina Sołtys , Magnus Wahlström , Xi Wu

Given a graph $G=(V,E)$, a set $\mathcal{F}$ of forbidden subgraphs, we study $\mathcal{F}$-Free Edge Deletion, where the goal is to remove minimum number of edges such that the resulting graph does not contain any $F\in \mathcal{F}$ as a…

Data Structures and Algorithms · Computer Science 2021-02-12 Ajinkya Gaikwad , Soumen Maity

For many taxa, the current high rates of extinction are likely to result in a significant loss of biodiversity. The evolutionary heritage of biodiversity is frequently quantified by a measure called phylogenetic diversity (PD). We predict…

Populations and Evolution · Quantitative Biology 2013-06-13 Amaury Lambert , Mike Steel

The starting point of our work is a decade-old open question concerning the subexponential parameterized complexity of \textsc{2-Layer Crossing Minimization}. In this problem, the input is an $n$-vertex graph $G$ whose vertices are…

Data Structures and Algorithms · Computer Science 2025-10-16 Fedor V. Fomin , Petr A. Golovach , Tanmay Inamdar , Saket Saurabh , Meirav Zehavi

Given a graph G, a matching is a subset of edges of G that do not share an endpoint. A matching M is uniquely restricted if the subgraph induced by the endpoints of the edges of M has exactly one perfect matching. Given a graph G and a…

Data Structures and Algorithms · Computer Science 2025-08-19 Juhi Chaudhary , Ignasi Sau , Meirav Zehavi

In this paper we study a maximization version of the classical Edge Dominating Set (EDS) problem, namely, the Upper EDS problem, in the realm of Parameterized Complexity. In this problem, given an undirected graph $G$, a positive integer…

Data Structures and Algorithms · Computer Science 2022-08-05 Ajinkya Gaikwad , Soumen Maity

Phylogenetic networks are increasingly used in evolutionary biology to represent the history of species that have undergone reticulate events such as horizontal gene transfer, hybrid speciation and recombination. One of the most fundamental…

Populations and Evolution · Quantitative Biology 2016-10-07 Philippe Gambette , Leo van Iersel , Steven Kelk , Fabio Pardi , Celine Scornavacca

A parameterized problem consists of a classical problem and an additional component, the so-called parameter. This point of view allows a formal definition of preprocessing: Given a parameterized instance (I,k), a polynomial kernelization…

Computational Complexity · Computer Science 2009-10-26 Stefan Kratsch , Magnus Wahlstrom

Grid graphs, and, more generally, $k\times r$ grid graphs, form one of the most basic classes of geometric graphs. Over the past few decades, a large body of works studied the (in)tractability of various computational problems on grid…

Data Structures and Algorithms · Computer Science 2021-07-01 Siddharth Gupta , Guy Sa'ar , Meirav Zehavi

In the \textsc{Maximum Degree Contraction} problem, input is a graph $G$ on $n$ vertices, and integers $k, d$, and the objective is to check whether $G$ can be transformed into a graph of maximum degree at most $d$, using at most $k$ edge…

Data Structures and Algorithms · Computer Science 2020-09-25 Saket Saurabh , Prafullkumar Tale

We study the existence of polynomial kernels, for parameterized problems without a polynomial kernel on general graphs, when restricted to graphs of bounded twin-width. Our main result is that a polynomial kernel for $k$-Dominating Set on…

Data Structures and Algorithms · Computer Science 2021-09-15 Édouard Bonnet , Eun Jung Kim , Amadeus Reinald , Stéphan Thomassé , Rémi Watrigant

Given a finite set $X$, a collection $\mathcal{T}$ of rooted phylogenetic trees on $X$ and an integer $k$, the Hybridization Number problem asks if there exists a phylogenetic network on $X$ that displays all trees from $\mathcal{T}$ and…

Discrete Mathematics · Computer Science 2016-03-23 Leo van Iersel , Steven Kelk , Celine Scornavacca

An $\alpha$-approximate polynomial Turing kernelization is a polynomial-time algorithm that computes an $(\alpha c)$-approximate solution for a parameterized optimization problem when given access to an oracle that can compute…

Data Structures and Algorithms · Computer Science 2023-07-06 Stefan Kratsch , Pascal Kunz

We investigate the parameterized complexity of the graph editing problem called Editing to a Graph with a Given Degree Sequence, where the aim is to obtain a graph with a given degree sequence \sigma by at most k vertex or edge deletions…

Data Structures and Algorithms · Computer Science 2016-01-14 Petr A. Golovach , George B. Mertzios

A kernelization for a parameterized decision problem $\mathcal{Q}$ is a polynomial-time preprocessing algorithm that reduces any parameterized instance $(x,k)$ into an instance $(x',k')$ whose size is bounded by a function of $k$ alone and…

Data Structures and Algorithms · Computer Science 2023-10-09 Bart M. P. Jansen , Bart van der Steenhoven

Phylogenetic trees are leaf-labelled trees used to model the evolution of species. Here we explore the practical impact of kernelization (i.e. data reduction) on the NP-hard problem of computing the TBR distance between two unrooted binary…

Data Structures and Algorithms · Computer Science 2023-08-21 Rim van Wersch , Steven Kelk , Simone Linz , Georgios Stamoulis

Modeling of real-world systems with Petri nets allows to benefit from their generic concepts of parallelism, synchronisation and conflict, and obtain a concise yet expressive system representation. Algorithms for synthesis of a net from a…

Computational Complexity · Computer Science 2020-09-21 Ronny Tredup , Evgeny Erofeev

Parameterized complexity allows us to analyze the time complexity of problems with respect to a natural parameter depending on the problem. Reoptimization looks for solutions or approximations for problem instances when given solutions to…

Computational Complexity · Computer Science 2019-07-31 Hans-Joachim Böckenhauer , Elisabet Burjons , Martin Raszyk , Peter Rossmanith

We study the SHORTEST PATH problem with positive disjunctive constraints from the perspective of parameterized complexity. For positive disjunctive constraints, there are certain pair of edges such that any feasible solution must contain at…

Discrete Mathematics · Computer Science 2026-03-06 Susobhan Bandopadhyay , Suman Banerjee , Diptapriyo Majumdar , Fahad Panolan

A set S of vertices of a graph is a defensive alliance if, for each element of S, the majority of its neighbors is in S. The problem of finding a defensive alliance of minimum size in a given graph is NP-hard and there are polynomial-time…

Computational Complexity · Computer Science 2017-07-17 Bernhard Bliem , Stefan Woltran