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Autonomous data analysis agents are increasingly expected to conduct exploratory analysis with limited human guidance about data. However, existing benchmarks typically evaluate such agents in prior-guided settings, providing selected data…

Artificial Intelligence · Computer Science 2026-05-28 Qiaohong Zhang , Weihao Ye , Jialong Chen , Yi Luo , BoYuan Li , Bowen Deng , Zibin Zheng , Jianhao Lin , Wei-Shi Zheng , Chuan Chen

We introduce MLRC-Bench, a benchmark designed to quantify how effectively language agents can tackle challenging Machine Learning (ML) Research Competitions, with a focus on open research problems that demand novel methodologies. Unlike…

Single-cell RNA-Sequencing (scRNA-Seq) has undergone major technological advances in recent years, enabling the conception of various organism-level cell atlassing projects. With increasing numbers of datasets being deposited in public…

End-to-end automation of realistic healthcare operations stresses three capabilities underrepresented in current benchmarks: policy density, decisions must be grounded in a large library of medical, insurance, and operational rules;…

Large language and vision-language models increasingly power agents that act on a user's behalf through command-line interface (CLI) harnesses. However, most agent benchmarks still rely on synthetic sandboxes, short-horizon tasks,…

Single-cell RNA sequencing (scRNA-seq) provides unprecedented insights into cellular heterogeneity, enabling detailed analysis of complex biological systems at single-cell resolution. However, the high dimensionality and technical noise…

Genomics · Quantitative Biology 2025-09-04 Hojjat Torabi Goudarzi , Maziyar Baran Pouyan

AI agents are changing the requirements for document parsing. What matters is semantic correctness: parsed output must preserve the structure and meaning needed for autonomous decisions, including correct table structure, precise chart…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Boyang Zhang , Sebastián G. Acosta , Preston Carlson , Sacha Bron , Pierre-Loïc Doulcet , Daniel B. Ospina , Simon Suo

AI coding agents demonstrate strong performance on general-purpose software benchmarks. However, their ability to handle 5G network engineering tasks remains unexplored. We propose SWE-Bench~5G, the first benchmark designed to investigate…

Networking and Internet Architecture · Computer Science 2026-04-30 Jiao Chen , Jianhua Tang , Xiaotong Yang , Zuohong Lv

Benchmarks for Software Engineering (SE) AI agents, most notably SWE-bench, have catalyzed progress in programming capabilities of AI agents. However, they overlook critical developer workflows such as Version Control System (VCS)…

Software Engineering · Computer Science 2025-05-29 Tobias Lindenbauer , Egor Bogomolov , Yaroslav Zharov

Code generation has emerged as one of AI's highest-impact use cases, yet existing benchmarks measure isolated tasks rather than the complete "zero-to-one" process of building a working application from scratch. We introduce Vibe Code Bench,…

Software Engineering · Computer Science 2026-05-15 Hung Tran , Langston Nashold , Rayan Krishnan , Antoine Bigeard , Alex Gu

LLM-based agent systems are emerging as a new software paradigm and have been widely adopted across diverse domains such as medicine, robotics, and programming. However, maintaining these systems requires substantial effort, as they are…

Artificial Intelligence · Computer Science 2025-10-27 Alfin Wijaya Rahardja , Junwei Liu , Weitong Chen , Zhenpeng Chen , Yiling Lou

Generative AI agents, software systems powered by Large Language Models (LLMs), are emerging as a promising approach to automate cybersecurity tasks. Among the others, penetration testing is a challenging field due to the task complexity…

Cryptography and Security · Computer Science 2024-10-29 Luca Gioacchini , Marco Mellia , Idilio Drago , Alexander Delsanto , Giuseppe Siracusano , Roberto Bifulco

Human placenta is a complex and heterogeneous organ interfacing between the mother and the fetus that supports fetal development. Alterations to placental structural components are associated with various pregnancy complications. To reveal…

Tissues and Organs · Quantitative Biology 2020-08-11 Hui Li , Qianhui Huang , Yu Liu , Lana X Garmire

Single-cell RNA-sequencing (scRNA-seq) stands as a powerful tool for deciphering cellular heterogeneity and exploring gene expression profiles at high resolution. However, its high cost renders it impractical for extensive sample cohorts…

Autonomous AI research agents aim to accelerate scientific discovery by automating the research pipeline, from hypothesis generation to peer review. However, existing benchmarks rarely test a fundamental bottleneck: whether Large Language…

Machine Learning · Computer Science 2026-05-29 Sy-Tuyen Ho , Minghui Liu , Huy Nghiem , Furong Huang

While large language models have significantly accelerated scientific code generation, comprehensively evaluating the generated code remains a major challenge. Traditional benchmarks reduce evaluation to test-case matching, an approach…

Artificial Intelligence · Computer Science 2026-03-18 Hong Zhang , Barry Smith , Satish Balay , Le Chen , Murat Keceli , Lois Curfman McInnes , Junchao Zhang

The advancements of large language models (LLMs) have piqued growing interest in developing LLM-based language agents to automate scientific discovery end-to-end, which has sparked both excitement and skepticism about their true…

As benchmarks grow in complexity, many apparent agent failures are not failures of the agent at all - they are failures of the benchmark itself: broken specifications, implicit assumptions, and rigid evaluation scripts that penalize valid…

Computation and Language · Computer Science 2026-04-29 Xinming Tu , Tianze Wang , Yingzhou , Lu , Kexin Huang , Yuanhao Qu , Sara Mostafavi

Recent advances in large language models (LLMs) have enabled agentic systems that translate natural language intent into executable scientific visualization (SciVis) tasks. Despite rapid progress, the community lacks a principled and…

Benchmarks are essential for quantitatively tracking progress in AI. As AI agents become increasingly capable, researchers and practitioners have introduced agentic benchmarks to evaluate agents on complex, real-world tasks. These…

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