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Multiplex networks are a representation of real-world complex systems as a set of entities (i.e. nodes) connected via different types of connections (i.e. layers). The observed connections in these networks may not be complete and the link…

Physics and Society · Physics 2020-05-18 Amir Mahdi Abdolhosseini-Qomi , Naser Yazdani , Masoud Asadpour

The Python package pylimer-tools is a comprehensive toolkit for computational studies of polymer networks, particularly bead-spring networks. The package provides functionality to generate polymer networks using Monte Carlo (MC) procedures…

Soft Condensed Matter · Physics 2025-08-18 Tim Bernhard , Fabian Schwarz , Andrei A. Gusev

Multilayer networks or MLNs (also called multiplexes or network of networks) are being used extensively for modeling and analysis of data sets with multiple entity and feature types and associated relationships. Although the concept of…

Social and Information Networks · Computer Science 2019-10-07 Abhishek Santra , Kanthi Sannappa Komar , Sanjukta Bhowmick , Sharma Chakravarthy

Nested data structures arise when observations are grouped into distinct units, such as patients within hospitals or students within schools. Accounting for this hierarchical organization is essential for valid inference, as ignoring it can…

Computation · Statistics 2025-08-14 Francesco Denti , Laura D'Angelo

Ranking data represent a peculiar form of multivariate ordinal data taking values in the set of permutations. Despite the numerous methodological contributions to increase the flexibility of ranked data modeling, the application of more…

Computation · Statistics 2018-03-13 Cristina Mollica , Luca Tardella

The R package innsight offers a general toolbox for revealing variable-wise interpretations of deep neural networks' predictions with so-called feature attribution methods. Aside from the unified and user-friendly framework, the package…

Machine Learning · Statistics 2025-01-22 Niklas Koenen , Marvin N. Wright

The package mvlearnR and accompanying Shiny App is intended for integrating data from multiple sources or views or modalities (e.g. genomics, proteomics, clinical and demographic data). Most existing software packages for multiview learning…

Genomics · Quantitative Biology 2023-11-29 Elise F. Palzer , Sandra E. Safo

Graphlets are induced subgraph patterns that are crucial to the understanding of the structure and function of a large network. A lot of efforts have been devoted to calculating graphlet statistics where random walk based approaches are…

Social and Information Networks · Computer Science 2020-05-12 Simiao Jiao , Zihui Xue , Xiaowei Chen , Yuedong Xu

Multiplex networks are networks composed of multiple layers such that the number of nodes in all layers is the same and the adjacency matrices between the layers are diagonal. We consider the special class of multiplex networks where the…

Adaptation and Self-Organizing Systems · Physics 2021-06-25 Rico Berner , Volker Mehrmann , Eckehard Schöll , Serhiy Yanchuk

metasnf is an R package that enables users to apply meta clustering, a method for efficiently searching a broad space of cluster solutions by clustering the solutions themselves, to clustering workflows based on similarity network fusion…

The recently introduced locally orderless tensor network (LoTeNet) for supervised image classification uses matrix product state (MPS) operations on grids of transformed image patches. The resulting patch representations are combined back…

Computer Vision and Pattern Recognition · Computer Science 2021-03-22 Raghavendra Selvan , Silas Ørting , Erik B Dam

Industrial recommender systems critically depend on high-quality ranking models. However, traditional pipelines still rely on manual feature engineering and scenario-specific architectures, which hinder cross-scenario transfer and…

Information Retrieval · Computer Science 2025-10-20 Xianyang Qi , Yuan Tian , Zhaoyu Hu , Zhirui Kuai , Chang Liu , Hongxiang Lin , Lei Wang

The sparsity-restricted maximum likelihood estimator (SMLE) has received considerable attention for feature screening in ultrahigh-dimensional regression. SMLE is a computationally convenient method that naturally incorporates the joint…

Other Statistics · Statistics 2022-01-11 Qianxiang Zang , Chen Xu , Kelly Burkett

Network analysis has played a key role in knowledge discovery and data mining. In many real-world applications in recent years, we are interested in mining multilayer networks, where we have a number of edge sets called layers, which encode…

Social and Information Networks · Computer Science 2022-11-08 Yasushi Kawase , Atsushi Miyauchi , Hanna Sumita

For successful estimation, the usual network tomography algorithms crucially require i) end-to-end data generated using multicast probe packets, real or emulated, and ii) the network to be a tree rooted at a single sender with destinations…

Networking and Internet Architecture · Computer Science 2012-11-02 Gugan Thoppe

Existing RGB-Thermal Video Object Detection (RGBT VOD) methods predominantly rely on the manual alignment of image pairs, that is both labor-intensive and time-consuming. This dependency significantly restricts the scalability and practical…

Computer Vision and Pattern Recognition · Computer Science 2025-04-21 Qishun Wang , Zhengzheng Tu , Kunpeng Wang , Le Gu , Chuanwang Guo

The aim of the plsRglm package is to deal with complete and incomplete datasets through several new techniques or, at least, some which were not yet implemented in R. Indeed, not only does it make available the extension of the PLS…

Computation · Statistics 2018-10-03 F. Bertrand , M. Maumy-Bertrand

This paper proposes a parametric-based network architecture for joint channel estimation and data detection in communications systems with hardware impairments. This architecture is composed of a data-augmented layer, a custom soft…

Signal Processing · Electrical Eng. & Systems 2022-06-16 Vincent Choqueuse , Alexandru Frunza , Adel Belouchrani , Stéphane Azou , Pascal Morel

Complex networks are frequently employed to model physical or virtual complex systems. When certain entities exist across multiple systems simultaneously, unveiling their corresponding relationships across the networks becomes crucial. This…

Physics and Society · Physics 2025-04-16 Rui Tang , Ziyun Yong , Shuyu Jiang , Xingshu Chen , Yaofang Liu , Yi-Cheng Zhang , Gui-Quan Sun , Wei Wang

The paper introduces a Signed Generalized Random Dot Product Graph (SGRDPG) model, which is a variant of the Generalized Random Dot Product Graph (GRDPG), where, in addition, edges can be positive or negative. The setting is extended to a…

Social and Information Networks · Computer Science 2025-07-14 Marianna Pensky