English
Related papers

Related papers: Identifying knowledge gaps in biodiversity data an…

200 papers

A longstanding goal of biology is to identify the key genes and species that critically impact evolution, ecology, and health. Network analysis has revealed keystone species that regulate ecosystems and master regulators that regulate…

Quantitative Methods · Quantitative Biology 2022-09-14 Holger Eble , Michael Joswig , Lisa Lamberti , Will Ludington

Knowledge graphs, collectively as a knowledge network, have become critical tools for knowledge discovery in computable and explainable knowledge systems. Due to the semantic and structural complexities of biomedical data, these knowledge…

Other Quantitative Biology · Quantitative Biology 2025-09-29 Chunlei Wu , Hongfang Liu , Jason Flannick , Mark A. Musen , Andrew I. Su , Lawrence Hunter , Thomas M. Powers , Cathy H. Wu

Forests play a crucial role in Earth's system processes and provide a suite of social and economic ecosystem services, but are significantly impacted by human activities, leading to a pronounced disruption of the equilibrium within…

Computer Vision and Pattern Recognition · Computer Science 2024-11-01 Arthur Ouaknine , Teja Kattenborn , Etienne Laliberté , David Rolnick

Species interaction networks are a powerful tool for describing ecological communities; they typically contain nodes representing species, and edges representing interactions between those species. For the purposes of drawing abstract…

Machine Learning · Computer Science 2025-02-25 Sanaz Hasanzadeh Fard , Emily Dolson

As data-driven systems are increasingly deployed at scale, ethical concerns have arisen around unfair and discriminatory outcomes for historically marginalized groups that are underrepresented in training data. In response, work around AI…

Human-Computer Interaction · Computer Science 2022-09-21 Rie Kamikubo , Lining Wang , Crystal Marte , Amnah Mahmood , Hernisa Kacorri

Species distribution modeling is a highly versatile tool for understanding the intricate relationship between environmental conditions and species occurrences. However, the available data often lacks information on confirmed species absence…

Quantitative Methods · Quantitative Biology 2024-06-18 Robin Zbinden , Nina van Tiel , Benjamin Kellenberger , Lloyd Hughes , Devis Tuia

Species distribution models (SDMs) are widely used to predict species' geographic distributions, serving as critical tools for ecological research and conservation planning. Typically, SDMs relate species occurrences to environmental…

Machine Learning · Computer Science 2025-08-12 Hager Radi Abdelwahed , Mélisande Teng , Robin Zbinden , Laura Pollock , Hugo Larochelle , Devis Tuia , David Rolnick

Predicting species distributions using occupancy models accounting for imperfect detection is now commonplace in ecology. Recently, modelling spatial and temporal autocorrelation was proposed to alleviate the lack of replication in…

Applications · Statistics 2025-10-10 André Luís Luza , Didier Alard , Frédéric Barraquand

The difficulty of monitoring biodiversity at fine scales and over large areas limits ecological knowledge and conservation efforts. To fill this gap, Species Distribution Models (SDMs) predict species across space from spatially explicit…

Computer Vision and Pattern Recognition · Computer Science 2024-12-12 Lukas Picek , Christophe Botella , Maximilien Servajean , César Leblanc , Rémi Palard , Théo Larcher , Benjamin Deneu , Diego Marcos , Pierre Bonnet , Alexis Joly

Rapid biodiversity loss underscore the urgency of effective monitoring, yet manual surveys remain resource-intensive. While on-device AI offers a scalable alternative, its performance in the wild is often challenged by environmental…

Artificial Intelligence · Computer Science 2026-05-19 Jiaxing Li , Hao Fang , Chi Xu , Miao Zhang , Jiangchuan Liu , William I. Atlas , Katrina M. Connors , Mark A. Spoljaric

Information foraging connects optimal foraging theory in ecology with how humans search for information. The theory suggests that, following an information scent, the information seeker must optimize the tradeoff between exploration by…

Information Retrieval · Computer Science 2016-11-18 Peter Wittek , Ying-Hsang Liu , Sándor Darányi , Tom Gedeon , Ik Soo Lim

Global challenges such as food supply chain disruptions, public health crises, and natural hazard responses require access to and integration of diverse datasets, many of which are geospatial. Over the past few years, a growing number of…

Climate change is a major driver of biodiversity loss, changing the geographic range and abundance of many species. However, there remain significant knowledge gaps about the distribution of species, due principally to the amount of effort…

Computer Vision and Pattern Recognition · Computer Science 2023-05-03 Mélisande Teng , Amna Elmustafa , Benjamin Akera , Hugo Larochelle , David Rolnick

Biodiversity, the variation within and between species and ecosystems, is essential for human well-being and the equilibrium of the planet. It is critical for the sustainable development of human society and is an important global…

Biodiversity conservation depends on accurate, up-to-date information about wildlife population distributions. Motion-activated cameras, also known as camera traps, are a critical tool for population surveys, as they are cheap and…

Machine Learning · Computer Science 2019-10-23 Mohammad Sadegh Norouzzadeh , Dan Morris , Sara Beery , Neel Joshi , Nebojsa Jojic , Jeff Clune

Wetlands are important to communities, offering benefits ranging from water purification, and flood protection to recreation and tourism. Therefore, identifying and prioritizing potential wetland areas is a critical decision problem. While…

Information Retrieval · Computer Science 2024-06-11 Yoonhyuk Choi , Reepal Shah , John Sabo , K. Selcuk Candan , Huan Liu

Visually impaired people face important challenges related to orientation and mobility. Indeed, 56% of visually impaired people in France declared having problems concerning autonomous mobility. These problems often mean that visually…

Human-Computer Interaction · Computer Science 2015-12-04 Anke Brock , Christophe Jouffrais

The relationship between inequality and the biosphere has been hypothesized to mutual dependecies and feedbacks. If that is true, such feedbacks may give rise to inequality regimes and potential tipping points between them. Here we explore…

Artificial Intelligence (AI) is revolutionizing biodiversity research by enabling advanced data analysis, species identification, and habitats monitoring, thereby enhancing conservation efforts. Ensuring reproducibility in AI-driven…

Information Retrieval · Computer Science 2024-07-11 Waqas Ahmed , Vamsi Krishna Kommineni , Birgitta König-Ries , Jitendra Gaikwad , Luiz Gadelha , Sheeba Samuel