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Cryo-electron microscopy (EM) single particle reconstruction is an entirely general technique for 3D structure determination of macromolecular complexes. However, because the images are taken at low electron dose, it is extremely hard to…

Computer Vision and Pattern Recognition · Computer Science 2019-04-17 Yifeng Fan , Zhizhen Zhao

Fluorescent imaging plays a critical role in a myriad of scientific endeavors, particularly in the biological sciences. Three-dimensional imaging of fluorescent intensity often requires serial data acquisition, that is voxel-by-voxel…

Optics · Physics 2015-10-27 Jeffrey J. Field , David G. Winters , Randy A. Bartels

Chemical imaging enables label-free visualization of cells, tissues and living systems while providing direct biochemical information that is difficult to obtain with conventional fluorescence microscopy. Despite its promise in applications…

Computer Vision and Pattern Recognition · Computer Science 2026-05-12 Yongkang Li , Brian Wong , King Wai Chiu , Hanwen Xu , Tangqi Fang , Erin Dunnington , Dan Fu , Sheng Wang

Optical diffraction tomography is an indispensable tool for studying objects in three-dimensions due to its ability to accurately reconstruct scattering objects. Until now this technique has been limited to coherent light because spatial…

This paper is concerned with the problem of recovering third-order tensor data from limited samples. A recently proposed tensor decomposition (BMD) method has been shown to efficiently compress third-order spatiotemporal data. Using the…

Numerical Analysis · Mathematics 2024-02-21 Fan Tian , Mirjeta Pasha , Misha E. Kilmer , Eric Miller , Abani Patra

Fourier ptychography (FP) is a recently proposed computational imaging technique for high space-bandwidth product imaging. In real setups such as endoscope and transmission electron microscope, the common sample motion largely degrades the…

Available super-resolution techniques for 3D images are either computationally inefficient prior-knowledge-based iterative techniques or deep learning methods which require a large database of known low- and high-resolution image pairs. A…

Computer Vision and Pattern Recognition · Computer Science 2024-10-30 Janka Hatvani , Adrian Basarab , Jean-Yves Tourneret , Miklós Gyöngy , Denis Kouamé

Conventional 2D fluorescence imaging in glioma surgery cannot separate intrinsic fluorophore strength from attenuation with depth, creating depth-intensity ambiguity that can compromise assessment of residual tumour and fluorescence based…

Medical Physics · Physics 2026-04-07 Yucheng Bian , Sebastien Ourselin , Yijing Xie

We leverage deep learning techniques to jointly denoise and super-resolve biomedical images acquired with fluorescence microscopy. We develop a deep learning algorithm based on the networks and method described in the recent W2S paper to…

Image and Video Processing · Electrical Eng. & Systems 2020-04-24 Martin Chatton

Tensor completion is crucial in many scientific domains with missing data problems. Traditional low-rank tensor models, including CP, Tucker, and Tensor-Train, exploit low-dimensional structures to recover missing data. However, these…

Machine Learning · Computer Science 2025-05-19 Jingyang Li , Jiuqian Shang , Yang Chen

Lensless cameras offer significant advantages in size, weight, and cost compared to traditional lens-based systems. Without a focusing lens, lensless cameras rely on computational algorithms to recover the scenes from multiplexed…

Image and Video Processing · Electrical Eng. & Systems 2024-10-08 Xin Cai , Zhiyuan You , Hailong Zhang , Wentao Liu , Jinwei Gu , Tianfan Xue

Low-rank quaternion tensor completion method, a novel approach to recovery color videos and images is proposed in this paper. We respectively reconstruct a color image and a color video as a quaternion matrix (second-order tensor) and a…

Numerical Analysis · Mathematics 2020-01-30 Jifei Miao , Kit Ian Kou , Wankai Liu

The three-dimensional reconstruction of vocal folds in medicine usually involves endoscopy and an approach to extract depth information like structured light or stereo matching of images. The resulting mesh can accurately represent the…

Fluid Dynamics · Physics 2023-10-06 Daniel Zieger , Christoph Näger , Stefan Becker , Tobias Günther

Accurate synthesis of a full 3D MR image containing tumours from available MRI (e.g. to replace an image that is currently unavailable or corrupted) would provide a clinician as well as downstream inference methods with important…

Computer Vision and Pattern Recognition · Computer Science 2018-07-31 Raghav Mehta , Tal Arbel

Fourier ptychography microscopy (FPM), sharing its roots with synthetic aperture technique and phase retrieval method, is a recently developed computational microscopic super-resolution technique. By turning on the light-emitting diode…

Optics · Physics 2021-05-07 G. Zhou , S. Zhang , C. Zheng , T. Li , Y. Hu , Q. Hao

Adherent biological cells generate traction forces on a substrate that play a central role for migration, mechanosensing, differentiation, and collective behavior. The established method for quantifying this cell-substrate interaction is…

Cell Behavior · Quantitative Biology 2020-05-05 Yunfei Huang , Gerhard Gompper , Benedikt Sabass

An authentic face restoration system is becoming increasingly demanding in many computer vision applications, e.g., image enhancement, video communication, and taking portrait. Most of the advanced face restoration models can recover…

Computer Vision and Pattern Recognition · Computer Science 2023-07-19 Yang Zhao , Tingbo Hou , Yu-Chuan Su , Xuhui Jia. Yandong Li , Matthias Grundmann

Recovering color images and videos from highly undersampled data is a fundamental and challenging task in face recognition and computer vision. By the multi-dimensional nature of color images and videos, in this paper, we propose a novel…

Computer Vision and Pattern Recognition · Computer Science 2022-08-22 Chenjian Pan , Chen Ling , Hongjin He , Liqun Qi , Yanwei Xu

Recent years have witnessed the remarkable performance of diffusion models in various vision tasks. However, for image restoration that aims to recover clear images with sharper details from given degraded observations, diffusion-based…

Computer Vision and Pattern Recognition · Computer Science 2023-10-10 Liyan Wang , Qinyu Yang , Cong Wang , Wei Wang , Jinshan Pan , Zhixun Su

Fourier Ptychographic Microscopy (FPM) is a computational imaging method that is able to super-resolve features beyond the diffraction-limit set by the objective lens of a traditional microscope. This is accomplished by using synthetic…

Signal Processing · Electrical Eng. & Systems 2019-04-09 Michael Kellman , Emrah Bostan , Michael Chen , Laura Waller