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To analyze the evolutionary emergence of structural complexity in physical processes we introduce a general, but tractable, model of objects that interact to produce new objects. Since the objects--\emph{$epsilon$-machines}--have well…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 James P. Crutchfield , Olof Gornerup

Evolutionary game theory has been widely used to study the evolution of cooperation in social dilemmas where imitation-led strategy updates are typically assumed. However, results of recent behavioral experiments are not compatible with the…

Physics and Society · Physics 2018-12-19 Ik Soo Lim , Peter Wittek

There is a whole range of emergent phenomena in non-equilibrium behaviors can be well described by a set of stochastic differential equations. Inspired by an insight gained during our study of robustness and stability in phage lambda…

Other Condensed Matter · Physics 2016-09-08 P. Ao

Stochastic multiplicative dynamics characterize many complex natural phenomena such as selection and mutation in evolving populations, and the generation and distribution of wealth within social systems. Population heterogeneity in…

Physics and Society · Physics 2022-09-21 Jordan T. Kemp , Luís M. A. Bettencourt

Traditionally evolution is seen as a process where from a pool of possible variations of a population (e.g. biological species or industrial goods) a few variations get selected which survive and proliferate, whereas the others vanish.…

Populations and Evolution · Quantitative Biology 2008-09-25 Rudolf Hanel , Stefan Thurner

We consider an infinite locally finite system (configuration) $\gamma$ of particles distributed over a Euclidean space $X$. Each particle located at $x\in X$ carries an internal parameter (mark, or ``spin'') $\sigma_{x}\in S=\mathbb{R}.$…

Probability · Mathematics 2025-10-01 Alexei Daletskii , Dmitri Finkelshtein

Robustness to mutations and noise has been shown to evolve through stabilizing selection for optimal phenotypes in model gene regulatory networks. The ability to evolve robust mutants is known to depend on the network architecture. How do…

Molecular Networks · Quantitative Biology 2008-07-07 Volkan Sevim , Per Arne Rikvold

Swarms, such as schools of fish or drone formations, are prevalent in both natural and engineered systems. While previous works have focused on the social interactions within swarms, the role of external perturbations--such as environmental…

Quantitative Methods · Quantitative Biology 2025-07-08 Jonathan Karin , Zoe Piran , Mor Nitzan

Time series of observables measured from complex systems do often exhibit non-normal statistics, their statistical distributions (PDF's) are not gaussian and often skewed, with roughly exponential tails. Departure from gaussianity is…

Data Analysis, Statistics and Probability · Physics 2018-06-29 F. Sattin

Streaming Data-Driven Optimization (SDDO) problems arise in many applications where data arrive continuously and the optimization environment evolves over time. Concept drift produces non-stationary landscapes, making optimization methods…

Neural and Evolutionary Computing · Computer Science 2026-04-15 Yue Wu , Yuan-Ting Zhong , Ze-Yuan Ma , Yue-Jiao Gong

Genetic regulation is a key component in development, but a clear understanding of the structure and dynamics of genetic networks is not yet at hand. In this paper we investigate these properties within an artificial genome model originally…

Molecular Networks · Quantitative Biology 2009-08-26 Thimo Rohlf , Christopher R. Winkler

Updating machine learning models with new information usually improves their predictive performance, yet, in many applications, it is also desirable to avoid changing the model predictions too much. This property is called stability. In…

Machine Learning · Computer Science 2024-02-22 Morten Blørstad , Berent Å. S. Lunde , Nello Blaser

This beta technical report asks how reusable experience should be represented so that it can function as effective test-time control and as a substrate for iterative evolution. We study this question in 4.590 controlled trials across 45…

Software Engineering · Computer Science 2026-04-17 Junjie Wang , Yiming Ren , Haoyang Zhang

Sample average approximation (SAA) is a widely popular approach to data-driven decision-making under uncertainty. Under mild assumptions, SAA is both tractable and enjoys strong asymptotic performance guarantees. Similar guarantees,…

Optimization and Control · Mathematics 2016-11-03 Dimitris Bertsimas , Vishal Gupta , Nathan Kallus

This paper proposes a novel perspective on learning, positing it as the pursuit of dynamical invariants -- data combinations that remain constant or exhibit minimal change over time as a system evolves. This concept is underpinned by both…

Artificial Intelligence · Computer Science 2024-01-22 Alex Ushveridze

The idea of the inheritance of biological processes, such as the developmental process or the life cycle of an organism, has been discussed in the biology literature, but formal mathematical descriptions and plausible data analysis…

Populations and Evolution · Quantitative Biology 2024-04-30 Bahman Moraffah

We analyze the population dynamics of a broad class of fitness functions that exhibit epochal evolution---a dynamical behavior, commonly observed in both natural and artificial evolutionary processes, in which long periods of stasis in an…

adap-org · Physics 2007-05-23 James P. Crutchfield , Erik van Nimwegen

What is information, physically, and why does it so reliably emerge in living, cultural, and technological systems? Existing theories quantify uncertainty, cost, or compressibility, but do not identify which physical structures count as…

Neurons and Cognition · Quantitative Biology 2025-12-17 Wouter van der Wijngaart

The increasing prevalence of synthetic data in training loops has raised concerns about model collapse, where generative models degrade when trained on their own outputs. While prior work focuses on this self-consuming process, we study an…

Machine Learning · Computer Science 2025-03-12 Weiguo Gao , Ming Li

A punctuated equilibrium model of biological evolution with relative fitness between different species being the fundamental driving force of evolution is introduced. Mutation is modeled as a fitness updating cellular automaton process…

Condensed Matter · Physics 2015-06-25 H. F. Chau , L. Mak , P. K. Kwok
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