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Precision oncology requires accurate molecular insights, yet obtaining these directly from genomics is costly and time-consuming for broad clinical use. Predicting complex molecular features and patient prognosis directly from routine…

Computer Vision and Pattern Recognition · Computer Science 2025-06-25 Cheng Jin , Fengtao Zhou , Yunfang Yu , Jiabo Ma , Yihui Wang , Yingxue Xu , Huajun Zhou , Hao Jiang , Luyang Luo , Luhui Mao , Zifan He , Xiuming Zhang , Jing Zhang , Ronald Chan , Herui Yao , Hao Chen

The escalating adoption of diffusion models for applications such as image generation demands efficient parallel inference techniques to manage their substantial computational cost. However, existing diffusion parallelism inference schemes…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-16 Han Liang , Jiahui Zhou , Zicheng Zhou , Xiaoxi Zhang , Xu Chen

Efficient LLM inference on resource-constrained devices presents significant challenges in compute and memory utilization. Due to limited GPU memory, existing systems offload model weights to CPU memory, incurring substantial I/O overhead…

Machine Learning · Computer Science 2025-05-22 Xiangwen Zhuge , Xu Shen , Zeyu Wang , Fan Dang , Xuan Ding , Danyang Li , Yahui Han , Tianxiang Hao , Zheng Yang

Efficient execution of parameter sensitivity analysis (SA) is critical to allow for its routinely use. The pathology image processing application investigated in this work processes high-resolution whole-slide cancer tissue images from…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-11-01 Eduardo Scartezini , Willian Barreiros , Tahsin Kurc , Jun Kong , Alba C. M. A. Melo , Joel Saltz , George Teodoro

3D models surpass 2D models in CT/MRI segmentation by effectively capturing inter-slice relationships. However, the added depth dimension substantially increases memory consumption. While patch-based training alleviates memory constraints,…

Image and Video Processing · Electrical Eng. & Systems 2025-06-30 Young Seok Jeon , Hongfei Yang , Huazhu Fu , Mengling Feng

Inference for GP models with non-Gaussian noises is computationally expensive when dealing with large datasets. Many recent inference methods approximate the posterior distribution with a simpler distribution defined on a small number of…

Machine Learning · Computer Science 2018-09-11 Linfeng Liu , Liping Liu

There is growing demand for performing inference with hundreds of thousands of input tokens on trained transformer models. Inference at this extreme scale demands significant computational resources, hindering the application of…

Computation and Language · Computer Science 2025-02-13 Ryan Synk , Monte Hoover , John Kirchenbauer , Neel Jain , Alex Stein , Manli Shu , Josue Melendez Sanchez , Ramani Duraiswami , Tom Goldstein

Accurate multi-slice reconstruction from limited measurement data is crucial to speed up the acquisition process in medical and scientific imaging. However, it remains challenging due to the ill-posed nature of the problem and the high…

Image and Video Processing · Electrical Eng. & Systems 2025-12-09 Laurentius Valdy , Richard D. Paul , Alessio Quercia , Zhuo Cao , Xuan Zhao , Hanno Scharr , Arya Bangun

Diffusion models have shown remarkable performance in image generation in recent years. However, due to a quadratic increase in memory during generating ultra-high-resolution images (e.g. 4096*4096), the resolution of generated images is…

Computer Vision and Pattern Recognition · Computer Science 2024-05-09 Zhuoyi Yang , Heyang Jiang , Wenyi Hong , Jiayan Teng , Wendi Zheng , Yuxiao Dong , Ming Ding , Jie Tang

The increasing number of rectilinear floorplans in modern chip designs presents significant challenges for traditional macro placers due to the additional complexity introduced by blocked corners. Particularly, the widely adopted wirelength…

Hardware Architecture · Computer Science 2025-05-22 Xiaotian Zhao , Zixuan Li , Yichen Cai , Xinfei Guo

Accurate diagnosis of disease often depends on the exhaustive examination of Whole Slide Images (WSI) at microscopic resolution. Efficient handling of these data-intensive images requires lossy compression techniques. This paper…

In this paper, we introduce Writing in the Margins (WiM), a new inference pattern for Large Language Models designed to optimize the handling of long input sequences in retrieval-oriented tasks. This approach leverages the chunked prefill…

Computation and Language · Computer Science 2024-08-28 Melisa Russak , Umar Jamil , Christopher Bryant , Kiran Kamble , Axel Magnuson , Mateusz Russak , Waseem AlShikh

Medical image analysis often faces significant challenges due to limited expert-annotated data, hindering both model generalization and clinical adoption. We propose an expert-guided explainable few-shot learning framework that integrates…

Image and Video Processing · Electrical Eng. & Systems 2025-09-12 Ifrat Ikhtear Uddin , Longwei Wang , KC Santosh

Reinforcement learning (RL) has become a key training step for improving mathematical reasoning in large language models (LLMs), but it often has high GPU memory usage, which makes it hard to use in settings with limited resources. To…

Machine Learning · Computer Science 2026-05-11 Zhishen Sun , Sizhe Dang , Guang Dai , Haishan Ye

Cancer subtyping is one of the most challenging tasks in digital pathology, where Multiple Instance Learning (MIL) by processing gigapixel whole slide images (WSIs) has been in the spotlight of recent research. However, MIL approaches do…

Neural Architecture Search (NAS), a framework which automates the task of designing neural networks, has recently been actively studied in the field of deep learning. However, there are only a few NAS methods suitable for 3D medical image…

Image and Video Processing · Electrical Eng. & Systems 2019-09-04 Woong Bae , Seungho Lee , Yeha Lee , Beomhee Park , Minki Chung , Kyu-Hwan Jung

Computational pathology involves the digitization of stained tissues into whole-slide images (WSIs) that contain billions of pixels arranged as contiguous patches. Statistical analysis of WSIs largely focuses on classification via multiple…

Computer Vision and Pattern Recognition · Computer Science 2026-03-24 So Won Jeong , Veronika Ročková

Whole slide imaging is fundamental to biomedical microscopy and computational pathology. Previously, learning representations for gigapixel-sized whole slide images (WSIs) has relied on multiple instance learning with weak labels, which do…

Computer Vision and Pattern Recognition · Computer Science 2024-05-27 Xinhai Hou , Cheng Jiang , Akhil Kondepudi , Yiwei Lyu , Asadur Chowdury , Honglak Lee , Todd C. Hollon

Being able to learn on weakly labeled data, and provide interpretability, are two of the main reasons why attention-based deep multiple instance learning (ABMIL) methods have become particularly popular for classification of…

Computer Vision and Pattern Recognition · Computer Science 2022-03-09 Axel Andersson , Nadezhda Koriakina , Nataša Sladoje , Joakim Lindblad

Considering the profound transformation affecting pathology practice, we aimed to develop a scalable artificial intelligence (AI) system to diagnose colorectal cancer from whole-slide images (WSI). For this, we propose a deep learning (DL)…