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One of the major applications of generative models for drug Discovery targets the lead-optimization phase. During the optimization of a lead series, it is common to have scaffold constraints imposed on the structure of the molecules…

Quantitative Methods · Quantitative Biology 2021-01-05 Maxime Langevin , Herve Minoux , Maximilien Levesque , Marc Bianciotto

Searching new molecules in areas like drug discovery often starts from the core structures of candidate molecules to optimize the properties of interest. The way as such has called for a strategy of designing molecules retaining a…

Machine Learning · Computer Science 2020-09-03 Jaechang Lim , Sang-Yeon Hwang , Seungsu Kim , Seokhyun Moon , Woo Youn Kim

Reinforcement learning (RL) in few-shot scenarios with limited sensor data is challenging due to insufficient training samples, particularly in applications like Dynamic Voltage and Frequency Scaling (DVFS) where sensor readings are…

Machine Learning · Computer Science 2026-01-13 Mohammad Pivezhandi , Abusayeed Saifullah

Generative Artificial Intelligence (GenAI) holds a potential to advance existing educational technologies with capabilities to automatically generate personalised scaffolds that support students' self-regulated learning (SRL). While…

Recent advancements in deep learning-based modeling of molecules promise to accelerate in silico drug discovery. A plethora of generative models is available, building molecules either atom-by-atom and bond-by-bond or fragment-by-fragment.…

Reinforcement learning has been shown to improve the performance of large language models. However, traditional approaches like RLHF or RLAIF treat the problem as single-step. As focus shifts toward more complex reasoning and agentic tasks,…

Artificial Intelligence · Computer Science 2025-04-29 Anna Goldie , Azalia Mirhoseini , Hao Zhou , Irene Cai , Christopher D. Manning

The discovery of high-performance photosensitizers has long been hindered by the time-consuming and resource-intensive nature of traditional trial-and-error approaches. Here, we present \textbf{A}I-\textbf{A}ccelerated…

Materials Science · Physics 2025-11-25 Hongyi Wang , Xiuli Zheng , Weimin Liu , Zitian Tang , Sheng Gong

Flow-based super-resolution (SR) models have demonstrated astonishing capabilities in generating high-quality images. However, these methods encounter several challenges during image generation, such as grid artifacts, exploding inverses,…

Computer Vision and Pattern Recognition · Computer Science 2024-05-30 Li-Yuan Tsao , Yi-Chen Lo , Chia-Che Chang , Hao-Wei Chen , Roy Tseng , Chien Feng , Chun-Yi Lee

Photonic computing chips have made significant progress in accelerating linear computations, but nonlinear computations are usually implemented in the digital domain, which introduces additional system latency and power consumption, and…

Analog circuit topology synthesis is integral to Electronic Design Automation (EDA), enabling the automated creation of circuit structures tailored to specific design requirements. However, the vast design search space and strict constraint…

Computation and Language · Computer Science 2025-06-04 Prashanth Vijayaraghavan , Luyao Shi , Ehsan Degan , Vandana Mukherjee , Xin Zhang

We introduce SynFormer, a generative modeling framework designed to efficiently explore and navigate synthesizable chemical space. Unlike traditional molecular generation approaches, we generate synthetic pathways for molecules to ensure…

Machine Learning · Computer Science 2024-10-07 Wenhao Gao , Shitong Luo , Connor W. Coley

Recent advances in diffusion-based generative models have demonstrated significant potential in augmenting scarce datasets for object detection tasks. Nevertheless, most recent models rely on resource-intensive full fine-tuning of…

Computer Vision and Pattern Recognition · Computer Science 2025-09-01 Alvaro Patricio , Atabak Dehban , Rodrigo Ventura

Over the last decade, there has been significant progress in the field of machine learning for de novo drug design, particularly in deep generative models. However, current generative approaches exhibit a significant challenge as they do…

Cell imaging assays utilizing fluorescence stains are essential for observing sub-cellular organelles and their responses to perturbations. Immunofluorescent staining process is routinely in labs, however the recent innovations in…

Protein design often begins with the knowledge of a desired function from a motif which motif-scaffolding aims to construct a functional protein around. Recently, generative models have achieved breakthrough success in designing scaffolds…

Diffusion models can learn rich representations during data generation, showing potential for Self-Supervised Learning (SSL), but they face a trade-off between generative quality and discriminative performance. Their iterative sampling also…

Machine Learning · Computer Science 2025-12-24 Kosuke Ukita , Tsuyoshi Okita

Developing inverse design methods for functional materials with specific properties is critical to advancing fields like renewable energy, catalysis, energy storage, and carbon capture. Generative models based on diffusion principles can…

Materials Science · Physics 2026-05-19 Xiao-Qi Han , Peng-Jie Guo , Ze-Feng Gao , Hao Sun , Zhong-Yi Lu

We present Flow-Guided Density Ratio Learning (FDRL), a simple and scalable approach to generative modeling which builds on the stale (time-independent) approximation of the gradient flow of entropy-regularized f-divergences introduced in…

Machine Learning · Computer Science 2024-06-06 Alvin Heng , Abdul Fatir Ansari , Harold Soh

Few-shot class-incremental learning (FSCIL) is challenging due to extremely limited training data while requiring models to acquire new knowledge without catastrophic forgetting. Recent works have explored generative models, particularly…

Computer Vision and Pattern Recognition · Computer Science 2025-09-30 Junsu Kim , Yunhoe Ku , Dongyoon Han , Seungryul Baek
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