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This study presents a comparison of quantitative MRI methods based on an efficiency metric that quantifies their intrinsic ability to extract information about tissue parameters. Under a regime of unbiased parameter estimates, an intrinsic…

Healthcare applications are inherently multimodal, benefiting greatly from the integration of diverse data sources. However, the modalities available in clinical settings can vary across different locations and patients. A key area that…

Computer Vision and Pattern Recognition · Computer Science 2025-09-04 Mohammed Amer , Mohamed A. Suliman , Tu Bui , Nuria Garcia , Serban Georgescu

Video microscopy has a long history of providing insights and breakthroughs for a broad range of disciplines, from physics to biology. Image analysis to extract quantitative information from video microscopy data has traditionally relied on…

Image and Video Processing · Electrical Eng. & Systems 2024-06-12 Benjamin Midtvedt , Saga Helgadottir , Aykut Argun , Jesús Pineda , Daniel Midtvedt , Giovanni Volpe

Harnessing the power of pre-training on large-scale datasets like ImageNet forms a fundamental building block for the progress of representation learning-driven solutions in computer vision. Medical images are inherently different from…

Computer Vision and Pattern Recognition · Computer Science 2023-08-01 Jeya Maria Jose Valanarasu , Yucheng Tang , Dong Yang , Ziyue Xu , Can Zhao , Wenqi Li , Vishal M. Patel , Bennett Landman , Daguang Xu , Yufan He , Vishwesh Nath

Following the success of deep learning in a wide range of applications, neural network-based machine learning techniques have received interest as a means of accelerating magnetic resonance imaging (MRI). A number of ideas inspired by deep…

Signal Processing · Electrical Eng. & Systems 2019-04-03 Florian Knoll , Kerstin Hammernik , Chi Zhang , Steen Moeller , Thomas Pock , Daniel K. Sodickson , Mehmet Akcakaya

Functional magnetic resonance imaging (fMRI) is widely used for studying and diagnosing brain disorders, with functional connectivity (FC) matrices providing powerful representations of large-scale neural interactions. However, existing…

Tissues and Organs · Quantitative Biology 2026-04-17 Qianyu Chen , Shujian Yu

Magnetic resonance spectroscopic imaging (SI) is a unique imaging technique that provides biochemical information from in vivo tissues. The 1H spectra acquired from several spatial regions are quantified to yield metabolite concentrations…

Medical Physics · Physics 2019-10-23 Zohaib Iqbal , Dan Nguyen , Gilbert Hangel , Stanislav Motyka , Wolfgang Bogner , Steve Jiang

Acquiring fully-sampled MRI $k$-space data is time-consuming, and collecting accelerated data can reduce the acquisition time. Employing 2D Cartesian-rectilinear subsampling schemes is a conventional approach for accelerated acquisitions;…

Image and Video Processing · Electrical Eng. & Systems 2023-08-11 George Yiasemis , Clara I. Sánchez , Jan-Jakob Sonke , Jonas Teuwen

Objective: Quantitative $T_1\rho$ imaging has potential for assessment of biochemical alterations of liver pathologies. Deep learning methods have been employed to accelerate quantitative $T_1\rho$ imaging. To employ artificial…

Medical Physics · Physics 2023-10-11 Chaoxing Huang , Vincent Wai Sun Wong , Queenie Chan , Winnie Chiu Wing Chu , Weitian Chen

To safely deploy deep learning models in the clinic, a quality assurance framework is needed for routine or continuous monitoring of input-domain shift and the models' performance without ground truth contours. In this work, cardiac…

Image and Video Processing · Electrical Eng. & Systems 2023-05-22 Xiyao Jin , Yao Hao , Jessica Hilliard , Zhehao Zhang , Maria A. Thomas , Hua Li , Abhinav K. Jha , Geoffrey D. Hugo

Deep learning networks have shown promising results in fast magnetic resonance imaging (MRI) reconstruction. In our work, we develop deep networks to further improve the quantitative and the perceptual quality of reconstruction. To begin…

Brain tumors are serious health problems that require early diagnosis due to their high mortality rates. Diagnosing tumors by examining Magnetic Resonance Imaging (MRI) images is a process that requires expertise and is prone to error.…

Computer Vision and Pattern Recognition · Computer Science 2026-04-10 Mustafa Yurdakul , Şakir Taşdemir

We propose a novel automatic method for accurate segmentation of the prostate in T2-weighted magnetic resonance imaging (MRI). Our method is based on convolutional neural networks (CNNs). Because of the large variability in the shape, size,…

Image and Video Processing · Electrical Eng. & Systems 2020-01-01 Davood Karimi , Golnoosh Samei , Yanan Shao , Septimiu Salcudean

Magnetic Resonance Imaging (MRI) of the brain has been used to investigate a wide range of neurological disorders, but data acquisition can be expensive, time-consuming, and inconvenient. Multi-site studies present a valuable opportunity to…

Computer Vision and Pattern Recognition · Computer Science 2018-04-13 Harrison Nguyen , Richard W. Morris , Anthony W. Harris , Mayuresh S. Korgoankar , Fabio Ramos

Background: Brain maturation and aging involve significant microstructural changes, resulting in functional and cognitive alterations. Quantitative MRI (qMRI) can measure this evolution, distinguishing the physiological effects of normal…

Magnetic Resonance Imaging (MRI) is a widely used medical imaging technique, but its long acquisition time can be a limiting factor in clinical settings. To address this issue, researchers have been exploring ways to reduce the acquisition…

Computer Vision and Pattern Recognition · Computer Science 2024-04-09 Pu Yang , Bin Dong

Diffusion MRI is a powerful tool that serves as a bridge between brain microstructure and cognition. Recent advancements in cognitive neuroscience have highlighted the persistent challenge of understanding how individual differences in…

Neurons and Cognition · Quantitative Biology 2024-09-25 Gabriela Gómez Jiménez , Demian Wassermann

Self-supervised learning is crucial for clinical imaging applications, given the lack of explicit labels in healthcare. However, conventional approaches that rely on precise vision-language alignment are not always feasible in complex…

Computer Vision and Pattern Recognition · Computer Science 2023-04-18 Jielin Qiu , Peide Huang , Makiya Nakashima , Jaehyun Lee , Jiacheng Zhu , Wilson Tang , Pohao Chen , Christopher Nguyen , Byung-Hak Kim , Debbie Kwon , Douglas Weber , Ding Zhao , David Chen

Purpose: The clinical feasibility and translation of many advanced quantitative MRI (qMRI) techniques are inhibited by their restriction to 'research mode', due to resource-intensive, offline parameter estimation. This work aimed to achieve…

We propose neural network layers that explicitly combine frequency and image feature representations and show that they can be used as a versatile building block for reconstruction from frequency space data. Our work is motivated by the…

Computer Vision and Pattern Recognition · Computer Science 2023-06-29 Nalini M. Singh , Juan Eugenio Iglesias , Elfar Adalsteinsson , Adrian V. Dalca , Polina Golland