Related papers: Random knotting in very long off-lattice self-avoi…
We use a version of simulated annealing with knot-type preserving moves to find polygonal representatives of various knot types with low stick number. These give better bounds on stick numbers of prime knots through 10 crossings, and for…
We study the number of isolated nodes in a soft random geometric graph whose vertices constitute a Poisson process on the torus of length L (the line segment [0,L] with periodic boundary conditions), and where an edge is present between two…
The ropelength of a knot is the minimum contour length of a tube of unit radius that traces out the knot in three dimensional space without self-overlap, colloquially the minimum amount of rope needed to tie a given knot. Theoretical upper…
Using techniques from Poisson approximation, we prove explicit error bounds on the number of permutations that avoid any pattern. Most generally, we bound the total variation distance between the joint distribution of pattern occurrences…
We introduce a notion of intrinsic linking and knotting for virtual spatial graphs. Our theory gives two filtrations of the set of all graphs, allowing us to measure, in a sense, how intrinsically linked or knotted a graph is; we show that…
We use matchings on Lyndon words to classify flat knots up to 8 crossings. Using flat knots invariants such as the based matrix, the $\phi$-invariant, the flat arrow polynomial, and the flat Jones-Krushkal polynomial, we distinguish all…
For all natural numbers $N$ and prime numbers $p$, we find a knot $K$ whose skein polynomial $P_K(a,z)$ evaluated at $z=N$ has trivial reduction modulo $p$. An interesting consequence of our construction is that all polynomials $P_K(a,N)$…
We use the finite lattice method to calculate the radius of gyration, the first and second area-weighted moments of self-avoiding polygons on the square lattice. The series have been calculated for polygons up to perimeter 82. Analysis of…
It is a major unsolved problem as to whether unknot recognition - that is, testing whether a given closed loop in R^3 can be untangled to form a plain circle - has a polynomial time algorithm. In practice, trivial knots (which can be…
We study experimentally statistical properties of the opening times of knots in vertically vibrated granular chains. Our measurements are in good qualitative and quantitative agreement with a theoretical model involving three random walks…
We introduce a fast implementation of the pivot algorithm for self-avoiding walks, which we use to obtain large samples of walks on the cubic lattice of up to $33 \times 10^6$ steps. Consequently the critical exponent $\nu$ for…
We discuss the scattering function of a Gaussian random polygon with N nodes under a given topological constraint through simulation. We obtain the Kratky plot of a Gaussian polygon of N=200 having a fixed knot for some different knots such…
We prove quantitative sub-ballisticity for the self-avoiding walk on the hexagonal lattice. Namely, we show that with high probability a self-avoiding walk of length $n$ does not exit a ball of radius $O(n/\log{n})$. Previously, only a…
This paper discusses some geometric ideas associated with knots in real projective 3-space $\mathbb{R}P^3$. These ideas are borrowed from classical knot theory. Since knots in $\mathbb{R}P^3$ are classified into three disjoint classes, -…
Knotted ribbons form an important topic in knot theory. They have applications in natural sciences, such as cyclic duplex DNA modeling. A flat knotted ribbon can be obtained by gently pulling a knotted ribbon tight so that it becomes flat…
Scaling arguments are used to analyze the size of topologically constrained closed ring polymer with excluded volume. It is found that there exists a finite range of polymer thickness (excluded volume) in which self-avoidance is unimportant…
This paper focuses on the graphs in the Petersen family, the set of minor minimal intrinsically linked graphs. We prove there is a relationship between algebraic linking of an embedding and knotting in an embedding. We also present a more…
We classify all knot diagrams of genus two and three, and give applications to positive, alternating and homogeneous knots, including a classification of achiral genus 2 alternating knots, slice or achiral 2-almost positive knots, a proof…
Random braids that are formed by multiplying randomly chosen permutation braids are studied by analyzing their behavior under Garside's weighted decomposition and cycling. Using this analysis, we propose a polynomial-time algorithm to the…
The viscous flow of polymer chains in dense melts is dominated by topological constraints whenever the single chain contour length, N, becomes larger than the characteristic scale Ne, defining comprehensively the macroscopic rheological…