Related papers: The largest common subtree of two random trees
Polytrees are a subclass of Bayesian networks that seek to capture the conditional dependencies between a set of $n$ variables as a directed forest and are motivated by their more efficient inference and improved interpretability. Since the…
The aim of this paper is to provide an affirmative answer to a recent question by Bubeck and Linial on the local profile of trees. For a tree $T$, let $p^{(k)}_1(T)$ be the proportion of paths among all $k$-vertex subtrees (induced…
This paper investigates some properties of the number of subtrees of a tree with given degree sequence. These results are used to characterize trees with the given degree sequence that have the largest number of subtrees, which generalizes…
Given two {0,1}-sequences X and Y of lengths m and n, respectively, we write L(X,Y) to denote the length of the longest common subsequence (LCS) of X and Y, and write L(m,n) to denote the expected value of L(X,Y) when X and Y are random…
Binary rooted trees, both in the ordered and in the un-ordered case, are well studied structures in the field of combinatorics. The aim of this work is to study particular patterns in these classes of trees. We consider completely…
We study the minimum spanning tree distribution on the space of spanning trees of the $n$-by-$n$ grid for large $n$. We establish bounds on the decay rates of the probability of the most and the least probable spanning trees as…
We consider random binary trees that appear as the output of certain standard algorithms for sorting and searching if the input is random. We introduce the subtree size metric on search trees and show that the resulting metric spaces…
We propose a new way to condition random trees, that is, condition random trees to have large maximal out-degree. Under this new conditioning, we show that conditioned critical Galton-Watson trees converge locally to size-biased trees with…
Frequent tree mining asks us to enumerate tree patterns that occur frequently in a database of rooted trees. This problem is motivated by tree-structured data in bioinformatics, such as glycans and pseudoknot-free RNA secondary structures.…
A tanglegram $\cal T$ consists of two rooted binary trees with the same number of leaves, and a perfect matching between the two leaf sets. In a layout, the tanglegrams is drawn with the leaves on two parallel lines, the trees on either…
Pairwise ordered tree alignment are combinatorial objects that appear in RNA secondary structure comparison. However, the usual representation of tree alignments as supertrees is ambiguous, i.e. two distinct supertrees may induce identical…
We improve the lower bound on the extremal version of the Maximum Agreement Subtree problem. Namely we prove that two binary trees on the same $n$ leaves have subtrees with the same $\geq c\log\log n$ leaves which are homeomorphic, such…
The Boolean lattice $2^{[n]}$ is the family of all subsets of $[n]=\{1,\dots,n\}$ ordered by inclusion, and a chain is a family of pairwise comparable elements of $2^{[n]}$. Let $s=2^{n}/\binom{n}{\lfloor n/2\rfloor}$, which is the average…
We give an algorithm to explicitly compute the largest subtree, in the local Bruhat-Tits tree for PSL_2(k), whose vertices correspond to orders containing a given suborder H, in terms of a set of generators for H. The shape of this subtree…
This paper introduces a new combinatorial framework for modeling the growth of binary trees through a discrete evolution process that incorporates a growing rule and an extinction rule. Building upon the theory of increasingly labeled…
We study a linear-fractional Bienaym\'e-Galton-Watson process with a general type space. The corresponding tree contour process is described by an alternating random walk with the downward jumps having a geometric distribution. This leads…
Let $L(n,d)$ denote the minimum possible number of leaves in a tree of order $n$ and diameter $d.$ In 1975 Lesniak gave the lower bound $B(n,d)=\lceil 2(n-1)/d\rceil$ for $L(n,d).$ When $d$ is even, $B(n,d)=L(n,d).$ But when $d$ is odd,…
Search trees on trees (STTs) generalize the fundamental binary search tree (BST) data structure: in STTs the underlying search space is an arbitrary tree, whereas in BSTs it is a path. An optimal BST of size $n$ can be computed for a given…
We consider the minimum spanning tree problem on a weighted complete bipartite graph $K_{n_R, n_B}$ whose $n=n_R+n_B$ vertices are random, i.i.d. uniformly distributed points in the unit cube in $d$ dimensions and edge weights are the…
We develop combinatorial methods for computing the rotation distance between binary trees, i.e., equivalently, the flip distance between triangulations of a polygon. As an application, we prove that, for each n, there exist size n trees at…