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Related papers: Biochemical Computing Mode for Sequential Logic

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With conventional silicon-based computing approaching its physical and efficiency limits, biocomputing emerges as a promising alternative. This approach utilises biomaterials such as DNA and neurons as an interesting alternative to data…

Emerging Technologies · Computer Science 2024-08-15 Giulio Basso , Reinhold Scherer , Michael Taynnan Barros

We report an experimental evaluation of the "input-output surface" for a biochemical AND gate. The obtained data are modeled within the rate-equation approach, with the aim to map out the gate function and cast it in the language of logic…

Molecular Networks · Quantitative Biology 2010-10-12 V. Privman , G. Strack , D. Solenov , M. Pita , E. Katz

We review enzymatic systems which involve biocatalytic reactions utilized for information processing (biocomputing). Extensive ongoing research in biocomputing, mimicking Boolean logic gates has been motivated by potential applications in…

Biological Physics · Physics 2010-10-12 Evgeny Katz , Vladimir Privman

Synthetic active colloidal systems are being studied extensively because of the diverse and often unusual phenomena these nonequilibrium systems manifest, and their potential applications in fields ranging from biology to material science.…

Soft Condensed Matter · Physics 2023-02-16 Jiang-Xing Chen , Jia-Qi Hu , Raymond Kapral

Biochemical computing is an emerging field of unconventional computing that attempts to process information with biomolecules and biological objects using digital logic. In this work we survey filtering in general, in biochemical computing,…

Recent advances in biochemical computing, i.e., information processing with cascades of primarily enzymatic reactions realizing computing gates, such as AND, OR, etc., as well as progress in networking these gates and coupling of the…

Biological Physics · Physics 2010-10-12 Vladimir Privman , Evgeny Katz , Joseph Wang

An astonishingly diverse biomolecular circuitry orchestrates the functioning machinery underlying every living cell. These biomolecules and their circuits have been engineered not only for various industrial applications but also to perform…

Biomolecules · Quantitative Biology 2021-02-15 Sahana Gangadharan , Karthik Raman

Biomolecular computers, along with quantum computers, may be a future alternative for traditional, silicon-based computers. Main advantages of biomolecular computers are massive parallel processing of data, expanded capacity of storing…

Emerging Technologies · Computer Science 2011-09-28 Janusz Blasiak , Tadeusz Krasinski , Tomasz Poplawski , Sebastian Sakowski

Rapid Single Flux Quantum (RSFQ) logic is a promising technology to supersede Complementary metal-oxide-semiconductor (CMOS) logic in some specialized areas due to providing ultra-fast and energy-efficient circuits. To realize a large-scale…

Hardware Architecture · Computer Science 2022-08-23 Shucheng Yang , Xiaoping Gao , Jie Ren

Quantum computing is a new way of data processing based on the concept of quantum mechanics. Quantum circuit design is a process of converting a quantum gate to a series of basic gates and is divided into two general categories based on the…

Emerging Technologies · Computer Science 2017-03-16 Moein Sarvaghad-Moghaddam

Programmable biomolecule-mediated computing is a new computing paradigm as compared to contemporary electronic computing. It employs nucleic acids and analogous biomolecular structures as information-storing and -processing substrates to…

Emerging Technologies · Computer Science 2024-01-30 Jian-Jun Shu , Zi Hian Tan , Qi-Wen Wang , Kian-Yan Yong

Molecular biology and biochemistry interpret microscopic processes in the living world in terms of molecular structures and their interactions, which are quantum mechanical by their very nature. Whereas the theoretical foundations of these…

Quantum Physics · Physics 2023-07-07 Alberto Baiardi , Matthias Christandl , Markus Reiher

Stochasticity is a key characteristic of intracellular processes such as gene regulation and chemical signalling. Therefore, characterising stochastic effects in biochemical systems is essential to understand the complex dynamics of living…

Molecular Networks · Quantitative Biology 2019-03-04 David J. Warne , Ruth E. Baker , Matthew J. Simpson

The ability to learn and respond to recurrent events depends on the capacity to remember transient biological signals received in the past. Moreover, it may be desirable to remember or ignore these transient signals conditioned upon other…

Molecular Networks · Quantitative Biology 2010-09-17 Georg Fritz , Nicolas E. Buchler , Terence Hwa , Ulrich Gerland

With the progressive scale-down of semiconductor's feature size, people are looking forward to More Moore and More than Moore. In order to offer a possible alternative implementation process, people are trying to figure out a feasible…

Emerging Technologies · Computer Science 2018-07-06 Chuan Zhang , Lulu Ge , Yuchen Zhuang , Ziyuan Shen , Zhiwei Zhong , Zaichen Zhang , Xiaohu You

Synthetic Biology is an interdisciplinary field that utilizes well-established engineering principles, ranging from electrical, control and computer systems, for analyzing the biological systems, such as biological circuits, enzymes,…

Logic in Computer Science · Computer Science 2019-12-25 Sa'ed Abed , Adnan Rashid , Osman Hasan

Biochemical computing attempts to process information with biomolecules and biological objects. In this work we review our results on analysis and optimization of single biochemical logic gates based on enzymatic reactions, and a network of…

Molecular Networks · Quantitative Biology 2010-09-22 Mary A. Arugula , Jan Halamek , Evgeny Katz , Dmitriy Melnikov , Marcos Pita , Vladimir Privman , Guinevere Strack

As quantum computing technology improves and quantum computers with a small but non-trivial number of N > 100 qubits appear feasible in the near future the question of possible applications of small quantum computers gains importance. One…

Quantum Physics · Physics 2014-08-07 Dave Wecker , Bela Bauer , Bryan K. Clark , Matthew B. Hastings , Matthias Troyer

Biology stores information and computes at the molecular scale, yet the ways in which it does so are often distinct from human-engineered computers. Mapping biological computation onto architectures familiar to computer science remains an…

Biological Physics · Physics 2026-03-31 Jan Kocka , Kabir Husain , Jaime Agudo-Canalejo

Our understanding of the physics of biological molecules, such as proteins and DNA, is limited because the approximations we usually apply to model inert materials are not in general applicable to soft, chemically inhomogeneous systems. The…

Quantum Physics · Physics 2010-07-13 Sarah Harris , Vivien M. Kendon
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