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Provided that there is no theoretical frame for complex engineered systems (CES) as yet, this paper claims that bio-inspired engineering can help provide such a frame. Within CES bio-inspired systems play a key role. The disclosure from…

Other Computer Science · Computer Science 2011-10-18 Nelson Alfonso Gómez-Cruz , Carlos Eduardo Maldonado

A while ago, the ideas of evolutionary biology inspired computer scientists to develop a thriving nowadays field of evolutionary computation (EC), in general, and genetic algorithms (GA), in particular. At the same time, the directed…

Quantitative Methods · Quantitative Biology 2019-12-09 Alexander Spirov , Ekaterina Myasnikova

Applications of machine learning in chemistry are often limited by the scarcity and expense of labeled data, restricting traditional supervised methods. In this work, we introduce a framework for molecular reasoning using general-purpose…

Given the impending timeline of developing good-quality quantum processing units, it is time to rethink the approach to advance quantum computing research. Rather than waiting for quantum hardware technologies to mature, we need to start…

Quantum Physics · Physics 2024-05-12 Koen Bertels , Emma Turki , Tamara Sarac , Aritra Sarkar , Imran Ashraf

Exploiting the effects of quantum interference we put forward an idea of designing three primary logic gates, OR, AND and NOT, using a benzene molecule. Under a specific molecule-lead interface geometry, anti-resonant states appear which…

Mesoscale and Nanoscale Physics · Physics 2018-09-19 Moumita Patra , Santanu K. Maiti

Replication of DNA and synthesis of proteins are studied from the view-point of quantum database search. Identification of a base-pairing with a quantum query gives a natural (and first ever) explanation of why living organisms have 4…

Quantum Physics · Physics 2009-11-06 Apoorva Patel

Free energy calculations are at the heart of physics-based analyses of biochemical processes. They allow us to quantify molecular recognition mechanisms, which determine a wide range of biological phenomena from how cells send and receive…

The rapid development of high-throughput sequencing technologies has led to an explosive increase in biological sequence data, making sequence clustering a fundamental task in large-scale bioinformatics analyses. Unlike traditional…

Genomics · Quantitative Biology 2026-01-22 Simeng Zhang , Xinying Liu , Jun Lou , Mudi Jiang , Quan Zou , Zengyou He

Over the last century, a large number of physical and mathematical developments paired with rapidly advancing technology have allowed the field of quantum chemistry to advance dramatically. However, the lack of computationally efficient…

Quantum Physics · Physics 2011-03-08 James D. Whitfield , Jacob Biamonte , Alán Aspuru-Guzik

The execution of quantum circuits on real systems has largely been limited to those which are simply time-ordered sequences of unitary operations followed by a projective measurement. As hardware platforms for quantum computing continue to…

Recent research in generalizing quantum computation from 2-valued qudits to d-valued qudits has shown practical advantages for scaling up a quantum computer. A further generalization leads to quantum computing with hybrid qudits where two…

Quantum Physics · Physics 2007-05-23 Faisal Shah Khan , Marek Perkowski

Despite the rapid development of quantum computing these years, state-of-the-art quantum devices still contain only a very limited number of qubits. One possible way to execute more realistic algorithms in near-term quantum devices is to…

Quantum Physics · Physics 2021-06-04 Xin Hong , Yuan Feng , Sanjiang Li , Mingsheng Ying

The quantum computation of electronic energies can break the curse of dimensionality that plagues many-particle quantum mechanics. It is for this reason that a universal quantum computer has the potential to fundamentally change…

We put forward a new proposal of designing charge-based logic devices considering a cyclic molecule that can be programmed and re-programmed for different functional logical operations and suitably engineered for data storage as well. The…

Mesoscale and Nanoscale Physics · Physics 2018-09-19 Moumita Patra , Santanu K. Maiti

We propose a method for implementation of a quantum computer using artificial molecules. The artificial molecule consists of two coupled quantum dots stacked along z direction and one single electron. One-qubit and two-qubit gates are…

Quantum Physics · Physics 2009-10-31 Nan-Jian Wu , M. Kamada , A. Natori , H. Yasunaga

We present both simulated and partial empirical evidence for the computational utility of many connected vesicle analogs of an encapsulated non-linear chemical processing medium. By connecting small vesicles containing a solution of…

Cellular Automata and Lattice Gases · Physics 2010-09-13 Julian Holley , Andrew Adamatzky , Larry Bull , Ben De Lacy Costello , Ishrat Jahan

Quantitative methods and mathematical modeling are playing an increasingly important role across disciplines. As a result, interdisciplinary mathematics courses are increasing in popularity. However, teaching such courses at an advanced…

Other Quantitative Biology · Quantitative Biology 2021-09-10 Mark Jayson Cortez , Alan Eric Akil , Krešimir Josić , Alexander J. Stewart

The rapid and successful strides in quantum chemistry in the past decades can be largely credited to a conspicuous synergy between theoretical and computational advancements. However, the architectural computer archetype that enabled such a…

Quantum Physics · Physics 2024-06-06 Daniel Claudino

Life is confronted with computation problems in a variety of domains including animal behavior, single-cell behavior, and embryonic development. Yet we currently do not know of a naturally existing biological system that is capable of…

Other Quantitative Biology · Quantitative Biology 2022-03-10 Hessameddin Akhlaghpour

Suppressing errors is the central challenge for useful quantum computing, requiring quantum error correction for large-scale processing. However, the overhead in the realization of error-corrected ``logical'' qubits, where information is…

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