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Related papers: Graph Drawing Stress Model with Resistance Distanc…

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A popular method of force-directed graph drawing is multidimensional scaling using graph-theoretic distances as input. We present an algorithm to minimize its energy function, known as stress, by using stochastic gradient descent (SGD) to…

Computational Geometry · Computer Science 2018-06-29 Jonathan X. Zheng , Samraat Pawar , Dan F. M. Goodman

Both Dimensionality Reduction (DR) and Graph Drawing (GD) aim to visualize abstract, non-linear structures, yet rely on different optimization paradigms. This contrast is evident in Multidimensional Scaling (MDS), which typically depends on…

Machine Learning · Computer Science 2026-05-04 Daniel Hangan , Stephen Kobourov , Jacob Miller

Resistance distance has been studied extensively in the past years, with the majority of previous studies devoted to undirected networks, in spite of the fact that various realistic networks are directed. Although several generalizations of…

Networking and Internet Architecture · Computer Science 2023-02-09 Mingzhe Zhu , Liwang Zhu , Huan Li , Wei Li , Zhongzhi Zhang

In graph signal processing, data samples are associated to vertices on a graph, while edge weights represent similarities between those samples. We propose a convex optimization problem to learn sparse well connected graphs from data. We…

Signal Processing · Electrical Eng. & Systems 2020-04-21 Eduardo Pavez , Antonio Ortega

We describe an efficient and scalable spherical graph embedding method. The method uses a generalization of the Euclidean stress function for Multi-Dimensional Scaling adapted to spherical space, where geodesic pairwise distances are…

Computational Geometry · Computer Science 2022-09-02 Jacob Miller , Vahan Huroyan , Stephen Kobourov

Embedding graphs in a geographical or latent space, i.e.\ inferring locations for vertices in Euclidean space or on a smooth manifold or submanifold, is a common task in network analysis, statistical inference, and graph visualization. We…

Computational Geometry · Computer Science 2022-05-18 Varsha Dani , Josep Díaz , Thomas P. Hayes , Cristopher Moore

Stress models are a promising approach for graph drawing. They minimize the weighted sum of the squared errors of the Euclidean and desired distances for each node pair. The desired distance typically uses the graph-theoretic distances…

Data Structures and Algorithms · Computer Science 2024-03-26 Yosuke Onoue

We propose a novel graph visualization method leveraging random walk-based embeddings to replace costly graph-theoretical distance computations. Using word2vec-inspired embeddings, our approach captures both structural and semantic…

Computational Geometry · Computer Science 2025-09-23 Minglai Yang , Reyan Ahmed

Graph embedding methods aim at finding useful graph representations by mapping nodes to a low-dimensional vector space. It is a task with important downstream applications, such as link prediction, graph reconstruction, data visualization,…

Machine Learning · Computer Science 2022-09-13 Said Kerrache , Hafida Benhidour

Graph embeddings, a class of dimensionality reduction techniques designed for relational data, have proven useful in exploring and modeling network structure. Most dimensionality reduction methods allow out-of-sample extensions, by which an…

Machine Learning · Statistics 2019-10-02 Keith Levin , Fred Roosta , Minh Tang , Michael W. Mahoney , Carey E. Priebe

In this paper, we present a hybrid graph-drawing algorithm (GDA) for layouting large, naturally-clustered, disconnected graphs. We called it a hybrid algorithm because it is an implementation of a series of already known graph-drawing and…

Graphics · Computer Science 2015-07-13 Toni-Jan Keith P. Monserrat , Jaderick P. Pabico , Eliezer A. Albacea

Efficient layout of large-scale graphs remains a challenging problem: the force-directed and dimensionality reduction-based methods suffer from high overhead for graph distance and gradient computation. In this paper, we present a new graph…

Social and Information Networks · Computer Science 2020-08-19 Minfeng Zhu , Wei Chen , Yuanzhe Hu , Yuxuan Hou , Liangjun Liu , Kaiyuan Zhang

We study the problem of embedding graphs in the plane as good geometric spanners. That is, for a graph $G$, the goal is to construct a straight-line drawing $\Gamma$ of $G$ in the plane such that, for any two vertices $u$ and $v$ of $G$,…

Data Structures and Algorithms · Computer Science 2020-02-14 Oswin Aichholzer , Manuel Borrazzo , Prosenjit Bose , Jean Cardinal , Fabrizio Frati , Pat Morin , Birgit Vogtenhuber

Most of the common graph layout principles (a.k.a. "aesthetics") on which many graph drawing algorithms are based are easy to define and to perceive. For example, the number of pairs of edges that cross each other, how symmetric a drawing…

Human-Computer Interaction · Computer Science 2024-09-24 Gavin J. Mooney , Helen C. Purchase , Michael Wybrow , Stephen G. Kobourov , Jacob Miller

Graph embedding aims to transfer a graph into vectors to facilitate subsequent graph analytics tasks like link prediction and graph clustering. Most approaches on graph embedding focus on preserving the graph structure or minimizing the…

Machine Learning · Computer Science 2020-03-04 Shirui Pan , Ruiqi Hu , Sai-fu Fung , Guodong Long , Jing Jiang , Chengqi Zhang

Graph embeddings have emerged as a powerful tool for representing complex network structures in a low-dimensional space, enabling the use of efficient methods that employ the metric structure in the embedding space as a proxy for the…

Social and Information Networks · Computer Science 2024-04-18 Radosław Nowak , Adam Małkowski , Daniel Cieślak , Piotr Sokół , Paweł Wawrzyński

Graph embedding is an effective method to represent graph data in a low dimensional space for graph analytics. Most existing embedding algorithms typically focus on preserving the topological structure or minimizing the reconstruction…

Machine Learning · Computer Science 2019-01-09 Shirui Pan , Ruiqi Hu , Guodong Long , Jing Jiang , Lina Yao , Chengqi Zhang

This work introduces a highly scalable spectral graph densification framework for learning resistor networks with linear measurements, such as node voltages and currents. We prove that given $O(\log N)$ pairs of voltage and current…

Machine Learning · Computer Science 2021-04-19 Zhuo Feng

Graph embedding has become an increasingly important technique for analyzing graph-structured data. By representing nodes in a graph as vectors in a low-dimensional space, graph embedding enables efficient graph processing and analysis…

Machine Learning · Computer Science 2023-09-13 Hamidreza Lotfalizadeh , Mohammad Al Hasan

The computation of resistance distance is pivotal in a wide range of graph analysis applications, including graph clustering, link prediction, and graph neural networks. Despite its foundational importance, efficient algorithms for…

Machine Learning · Computer Science 2026-01-19 Yichun Yang , Longlong Lin , Rong-Hua Li , Meihao Liao , Guoren Wang
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