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Neurons process information in ways that depend on their cell type, connectivity, and the brain region in which they are embedded. However, inferring these factors from neural activity remains a significant challenge. To build…

Machine Learning · Computer Science 2025-12-02 Vinam Arora , Divyansha Lachi , Ian J. Knight , Mehdi Azabou , Blake Richards , Cole L. Hurwitz , Josh Siegle , Eva L. Dyer

Biological neural networks are characterized by their high degree of plasticity, a core property that enables the remarkable adaptability of natural organisms. Importantly, this ability affects both the synaptic strength and the topology of…

Neural and Evolutionary Computing · Computer Science 2024-06-17 Erwan Plantec , Joachin W. Pedersen , Milton L. Montero , Eleni Nisioti , Sebastian Risi

$\textbf{Formal version available at}$ https://cell.com/patterns/fulltext/S2666-3899(23)00200-3 Networks of spiking neurons underpin the extraordinary information-processing capabilities of the brain and have become pillar models in…

Neural and Evolutionary Computing · Computer Science 2023-09-18 Gehua Ma , Rui Yan , Huajin Tang

Self-regulation of living tissue as an example of self-organization phenomena in active fractal systems of biological, ecological, and social nature is under consideration. The characteristic feature of these systems is the absence of any…

Tissues and Organs · Quantitative Biology 2008-12-02 Wassily Lubashevsky , Ihor Lubashevsky , Reinhard Mahnke

Molecular-motor generated active stresses drive the cytoskeleton away from equilibrium, endowing it with tunable mechanical properties that are essential for diverse functions such as cell division and motility[1-5]. Designing analogous…

Visual encoding and decoding models act as gateways to understanding the neural mechanisms underlying human visual perception. Typically, visual encoding models that predict brain activity from stimuli and decoding models that reproduce…

Machine Learning · Computer Science 2026-04-14 Weijian Mai , Mu Nan , Yu Zhu , Jiahang Cao , Rui Zhang , Yuqin Dai , Chunfeng Song , Andrew F. Luo , Jiamin Wu

Neural networks are composed of neurons and synapses, which are responsible for learning in a slow adaptive dynamical process. Here we experimentally show that neurons act like independent anisotropic multiplex hubs, which relay and mute…

Neurons and Cognition · Quantitative Biology 2017-07-21 Roni Vardi , Amir Goldental , Anton Sheinin , Shira Sardi , Ido Kanter

Animals excel at adapting their intentions, attention, and actions to the environment, making them remarkably efficient at interacting with a rich, unpredictable and ever-changing external world, a property that intelligent machines…

Machine Learning · Computer Science 2019-12-09 Nicolas Vecoven , Damien Ernst , Antoine Wehenkel , Guillaume Drion

Many natural systems are organized as networks, in which the nodes (be they cells, individuals or populations) interact in a time-dependent fashion. The dynamic behavior of these networks depends on how these nodes are connected, which can…

Neurons and Cognition · Quantitative Biology 2015-06-22 Anca Radulescu , Sergio Verduzco-Flores

We propose a stochastic dynamical model of noisy neural networks with complex architectures and discuss activation of neural networks by a stimulus, pacemakers and spontaneous activity. This model has a complex phase diagram with…

Disordered Systems and Neural Networks · Physics 2015-05-13 A. V. Goltsev , F. V. de Abreu , S. N. Dorogovtsev , J. F. F. Mendes

Understanding how complex systems respond to perturbations, such as whether they will remain stable or what their most sensitive patterns are, is a fundamental challenge across science and engineering. Traditional stability and receptivity…

Fluid Dynamics · Physics 2026-04-28 Chengyun Wang , Liwei Chen , Nils Thuerey

We offer a general theoretical framework for brain and behavior that is evolutionarily and computationally plausible. The brain in our abstract model is a network of nodes and edges. Although it has some similarities to standard neural…

Artificial Intelligence · Computer Science 2022-04-12 Joseph Y. Halpern , Arnon Lotem

In this work, a conceptual bio-inspired parallel and distributed learning framework for the emergence of general intelligence is proposed, where agents evolve through environmental rewards and learn throughout their lifetime without…

Neural and Evolutionary Computing · Computer Science 2020-09-23 Sidney Pontes-Filho , Stefano Nichele

Conceptual and mathematical models of neurons have lagged behind empirical understanding for decades. Here we extend previous work in modeling biological systems with fully scale-independent quantum information-theoretic tools to develop a…

Neurons and Cognition · Quantitative Biology 2022-07-21 Chris Fields , James F. Glazebrook , Michael Levin

An analytical theory is developed to describe the dynamics of a closed lipid bilayer membrane (vesicle) freely suspended in a general linear flow. Considering a nearly spherical shape, the solution to the creeping-flow equations is obtained…

Biological Physics · Physics 2009-11-13 Petia M. Vlahovska , Ruben Serral Gracia

Triggering a single additional spike in a cerebral cortical neuron was recently demonstrated to cause a cascade of extra spikes in the network that is likely to rapidly decorrelate the network's microstate. The mechanisms involved in this…

Neurons and Cognition · Quantitative Biology 2011-03-01 Michael Monteforte , Fred Wolf

Persistent activity is postulated to drive neural network plasticity and learning. To investigate its underlying cellular mechanisms, we developed a biophysically tractable model that explains the emergence, sustenance, and eventual…

Neurons and Cognition · Quantitative Biology 2009-11-13 Vladislav Volman , Richard Gerkin , Pak-Ming Lau , Eshel Ben-Jacob , Guo-Qiang Bi

To generate actions in the face of physiological delays, the brain must predict the future. Here we explore how prediction may lie at the core of brain function by considering a neuron predicting the future of a scalar time series input.…

Neurons and Cognition · Quantitative Biology 2024-01-09 Siavash Golkar , Jules Berman , David Lipshutz , Robert Mihai Haret , Tim Gollisch , Dmitri B. Chklovskii

Complexity in the temporal organization of neural systems may be a reflection of the diversity of its neural constituents. These constituents, excitatory and inhibitory neurons, comprise an invariant ratio in vivo and form the substrate for…

Neurons and Cognition · Quantitative Biology 2015-05-18 Xin Chen , Rhonda Dzakpasu

As deep learning gains popularity in modelling dynamical systems, we expose an underappreciated misunderstanding relevant to modelling dynamics on networks. Strongly influenced by graph neural networks, latent vertex embeddings are…

Machine Learning · Computer Science 2023-05-23 Bing Liu , Wei Luo , Gang Li , Jing Huang , Bo Yang
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