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Deep learning compiler frameworks are gaining ground as a more portable back-end for deep learning applications on increasingly diverse hardware. However, they face the daunting challenge of matching performance offered by hand-tuned…

Machine Learning · Computer Science 2021-02-10 Jaehun Ryu , Hyojin Sung

Single particle, cryogenic electron microscopy (cryo-EM) experiments now routinely produce high-resolution data for large proteins and their complexes. Building an atomic model into a cryo-EM density map is challenging, particularly when no…

Biomolecules · Quantitative Biology 2020-09-04 Po-Nan Li , Saulo H. P. de Oliveira , Soichi Wakatsuki , Henry van den Bedem

NVIDIA's CUDA Tile (CuTile) introduces a Python-based, tile-centric abstraction for GPU kernel development that aims to simplify programming while retaining Tensor Core and Tensor Memory Accelerator (TMA) efficiency on modern GPUs. We…

Machine Learning · Computer Science 2026-04-28 Divakar Kumar Yadav , Tian Zhao , Deepak Kumar

Adaptive mesh refinement (AMR) reduces computational costs in CFD by concentrating resolution where needed, but efficiently embedding complex, non-aligned geometries on GPUs remains challenging. We present a GPU-native algorithm for…

Computational Engineering, Finance, and Science · Computer Science 2026-04-28 Khodr Jaber , Ebenezer E. Essel , Pierre E. Sullivan

Efficient implementations of HPC applications for parallel architectures generally rely on external software packages (e.g., BLAS, LAPACK, CUDNN). While these libraries provide highly optimized routines for certain characteristics of inputs…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-02-16 Philippe Tillet , David Cox

GPUs have significantly accelerated first-order methods for large-scale optimization, especially in continuous optimization. However, this success has not transferred cleanly to problems with discrete variables, combinatorial structure, and…

Machine Learning · Computer Science 2026-05-22 Jiachang Liu , Andrea Lodi

As large language models (LLMs) continue to scale, their workloads increasingly rely on distributed execution across multiple GPUs. However, the conventional bulk synchronous parallel~(BSP) model used in such settings introduces significant…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-11-05 Octavian Alexandru Trifan , Karthik Sangaiah , Muhammad Awad , Muhammad Osama , Sumanth Gudaparthi , Alexandru Nicolau , Alexander Veidenbaum , Ganesh Dasika

Heterogeneous computing, which combines devices with different architectures, is rising in popularity, and promises increased performance combined with reduced energy consumption. OpenCL has been proposed as a standard for programing such…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-15 Thomas L. Falch , Anne C. Elster

GPU kernel optimization is increasingly critical for efficient deep learning systems, but writing high-performance kernels still requires substantial low-level expertise. Recent AI coding agents can iteratively read code, invoke compilers…

Fine-tuning Large Language Models (LLMs) has become essential for domain adaptation, but its memory-intensive property exceeds the capabilities of most GPUs. To address this challenge and democratize LLM fine-tuning, we present SlideFormer,…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-03-18 Ruijia Yang , Zeyi Wen

Generative models have become significant assets in the exploration and identification of new materials, enabling the rapid proposal of candidate crystal structures that satisfy target properties. Despite the increasing adoption of diverse…

Machine Learning · Computer Science 2025-10-21 Charles Rhys Campbell , Aldo H. Romero , Kamal Choudhary

Iterative GPU kernel tuning is bottlenecked by the scale of the applications that host the kernels. Rapid iteration requires isolating the kernel so it can be edited, recompiled, and validated without rebuilding the full application -- but…

Software Engineering · Computer Science 2026-05-07 Cole Ramos , Keith Lowery

Video analytics pipelines have steadily shifted to edge deployments to reduce bandwidth overheads and privacy violations, but in doing so, face an ever-growing resource tension. Most notably, edge-box GPUs lack the memory needed to…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-05-06 Arthi Padmanabhan , Neil Agarwal , Anand Iyer , Ganesh Ananthanarayanan , Yuanchao Shu , Nikolaos Karianakis , Guoqing Harry Xu , Ravi Netravali

High-quality quadrilateral mesh generation is a fundamental challenge in computer graphics. Traditional optimization-based methods are often constrained by the topological quality of input meshes and suffer from severe efficiency…

Graphics · Computer Science 2026-03-12 Yuguang Chen , Xinhai Liu , Xiangyu Zhu , Yiling Zhu , Zhuo Chen , Dongyu Zhang , Chunchao Guo

Many of today's deep neural network accelerators, e.g., Google's TPU and NVIDIA's tensor core, are built around accelerating the general matrix multiplication (i.e., GEMM). However, supporting convolution on GEMM-based accelerators is not…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-11 Yangjie Zhou , Mengtian Yang , Cong Guo , Jingwen Leng , Yun Liang , Quan Chen , Minyi Guo , Yuhao Zhu

We introduce Stream-K, a work-centric parallelization of matrix multiplication (GEMM) and related computations in dense linear algebra. Whereas contemporary decompositions are primarily tile-based, our method operates by partitioning an…

Data Structures and Algorithms · Computer Science 2023-01-11 Muhammad Osama , Duane Merrill , Cris Cecka , Michael Garland , John D. Owens

Mechanical product engineering often must comply with manufacturing or geometric constraints related to the shaping process. Mechanical design hence should rely on robust and fast tools to explore complex shapes, typically for design for…

Computational Engineering, Finance, and Science · Computer Science 2020-10-23 Waad Almasri , Dimitri Bettebghor , Fakhreddine Ababsa , Florence Danglade

The choice of parameters, and the design of the network architecture are important factors affecting the performance of deep neural networks. However, there has not been much work on developing an established and systematic way of building…

Neural and Evolutionary Computing · Computer Science 2018-05-25 Burak Kakillioglu , Yantao Lu , Senem Velipasalar

The increasing complexity and scale of Deep Neural Networks (DNNs) necessitate specialized tensor accelerators, such as Tensor Processing Units (TPUs), to meet various computational and energy efficiency requirements. Nevertheless,…

Hardware Architecture · Computer Science 2025-03-11 Deepak Vungarala , Mohammed E. Elbtity , Sumiya Syed , Sakila Alam , Kartik Pandit , Arnob Ghosh , Ramtin Zand , Shaahin Angizi

Understanding GPU topology is essential for performance-related tasks in HPC or AI. Yet, unlike for CPUs with tools like hwloc, GPU information is hard to come by, incomplete, and vendor-specific. In this work, we address this gap and…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-11-11 Stepan Vanecek , Manuel Walter Mussbacher , Dominik Groessler , Urvij Saroliya , Martin Schulz